DRSC/TRiP Functional Genomics Resources

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Protein Alignment vri and CEBPA

DIOPT Version :9

Sequence 1:NP_001137792.1 Gene:vri / 33759 FlyBaseID:FBgn0016076 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001274353.1 Gene:CEBPA / 1050 HGNCID:1833 Length:393 Species:Homo sapiens


Alignment Length:255 Identity:60/255 - (23%)
Similarity:89/255 - (34%) Gaps:68/255 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LQQKLAQLHHYSQQKLSGSDFPYGPRPPTGGKEEKLLLLAPPGKLYPEASVSTAMPEVLSGTPTN 130
            ::|:..:.....|..|:|. |||.|.||           .||...:|..      |......|  
Human   195 IKQEPREEDEAKQLALAGL-FPYQPPPP-----------PPPSHPHPHP------PPAHLAAP-- 239

  Fly   131 SHNKANIAM--MNNVRLSNISPTLSMNGSSNEASNLHPLSMYGGSISPQSNDSGMSDSLGKYVPG 193
             |.:..||.  ...:.|....||    .......:.||....|.:..|.              ||
Human   240 -HLQFQIAHCGQTTMHLQPGHPT----PPPTPVPSPHPAPALGAAGLPG--------------PG 285

  Fly   194 SGYGDGMMAQSP---SQGGNGPQSALTAAQKELFSQRKQREFTPDNKKDESYWDRRRRNNEAAKR 255
            |.. .|:.|..|   :.||:|...|..:.                :|....|..||.|||.|.::
Human   286 SAL-KGLGAAHPDLRASGGSGAGKAKKSV----------------DKNSNEYRVRRERNNIAVRK 333

  Fly   256 SREKRRYNDMVLEQRVIELTKENHVLKAQLDAIRDKFNISGENLVSVEKILASLPTSEQV 315
            ||:|.:..::..:|:|:|||.:|       |.:|.:.......|.::..|...||.|..|
Human   334 SRDKAKQRNVETQQKVLELTSDN-------DRLRKRVEQLSRELDTLRGIFRQLPESSLV 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vriNP_001137792.1 bZIP_NFIL3 238..297 CDD:269842 18/58 (31%)
coiled coil 239..297 CDD:269842 18/57 (32%)
CEBPANP_001274353.1 bZIP_CEBPA 315..375 CDD:269859 20/66 (30%)
coiled coil 317..375 CDD:269859 19/64 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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