DRSC/TRiP Functional Genomics Resources

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Protein Alignment vri and Nfilz

DIOPT Version :10

Sequence 1:NP_477191.1 Gene:vri / 33759 FlyBaseID:FBgn0016076 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001388159.1 Gene:Nfilz / 102546838 RGDID:7708626 Length:276 Species:Rattus norvegicus


Alignment Length:311 Identity:89/311 - (28%)
Similarity:128/311 - (41%) Gaps:86/311 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 DGMMAQSPSQGGN--------GPQSALTAAQKELFSQRKQREFTPDNKKDESYWDRRRRNNEAAK 254
            ||:  ..|:||.:        ||            :.|:||||.|:.|||..||::||:||||||
  Rat     4 DGL--SIPNQGPSKVFWGTRRGP------------TTRRQREFMPEEKKDTVYWEKRRKNNEAAK 54

  Fly   255 RSREKRRYNDMVLEQRVIELTKENHVLKAQLDAIRDKF----NISGENLVSVEKILASLPTSEQV 315
            |||||||.||:.:|.|:..|.:||.||:|:|.|::.:|    ::.|..::.::.:|         
  Rat    55 RSREKRRLNDVAIEGRLAMLLEENAVLRAELQALKLQFGLLPSMCGSRMLPLQALL--------- 110

  Fly   316 LSNTKRAKMSGSGGSSSGSS-----PSGSG---------SGEGSPQG--GHNGYP---------- 354
                  .|.|.:|.|.||:.     |.|.|         ||.....|  ...|:|          
  Rat   111 ------WKSSWTGESHSGADSFLPLPGGHGCLFKPYSVDSGIPGCSGCLVAQGWPGLSASSRFLQ 169

  Fly   355 VGPPLSPLIYGPNGNARPEATVKSVHHI-HHAGVAPPPTHLQQLVVPQSQT-QHLYQPQPQQHQP 417
            ...|||..|.....:|....||...|.: .|.|..           |:.:| ..|:.|.|.....
  Rat   170 ESEPLSHRIVDRAFHAAFPDTVFGCHFLDRHVGTR-----------PELKTCCGLWSPVPTGSHA 223

  Fly   418 HQQQQISQPPQQQQQQQEPS---PSAGSSS---PVISDPHNRPPSTTIANL 462
            .....||....:......||   |..|:.|   ..||.||.....:.:::|
  Rat   224 PGYSGISMASSESSMGFSPSMTCPVPGNRSEGLAQISLPHKLRIKSQLSSL 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vriNP_477191.1 bZIP_NFIL3 238..297 CDD:269842 32/62 (52%)
coiled coil 239..297 CDD:269842 31/61 (51%)
NfilzNP_001388159.1 bZIP_NFIL3 38..95 CDD:269842 32/56 (57%)
coiled coil 39..95 CDD:269842 31/55 (56%)

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