Sequence 1: | NP_001260093.1 | Gene: | Bsg25D / 33757 | FlyBaseID: | FBgn0000228 | Length: | 1118 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006240220.1 | Gene: | Nin / 299117 | RGDID: | 1306492 | Length: | 2157 | Species: | Rattus norvegicus |
Alignment Length: | 1448 | Identity: | 330/1448 - (22%) |
---|---|---|---|
Similarity: | 539/1448 - (37%) | Gaps: | 444/1448 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 EVSADPYEQKLYQMFRSCET-QCGLLDEKSLLKLCSLLELRDQGSALIASLGGSHQLG-VSFGQF 64
Fly 65 KEALL----NFLGSE--FDGNTSSGFIERSLVITDEPLNNTY--------IESPPESSDREVSPK 115
Fly 116 LVVGTKKYGRRSRPQ-----QGIYELSVTD---------------------SDNTDEDQLQQQ-- 152
Fly 153 -QNQRSLNG-------------------CDELGVQVQRSSSQSDLPGSRRLRSV-------HTSG 190
Fly 191 SKLKRC-ASLPARRKMNSN-------TTGATTSPTAAAKLKQLSIQSQAQHSS--SVESLGHRLA 245
Fly 246 TNPAPSSEHWRCYHGGRWSCCKDTVTPQQLETISVHSIMEAWELASIPNTRNLLHVLGFDEEEEV 310
Fly 311 NLQQLTKALEEELRGI-DGDHEQSNMLRALAALQATELGNYRLAYRQQHEENLKLRADNKAANQR 374
Fly 375 VALLAVEVDERHASLEDNSKKQVQQLEQRHASMVREITLRMTNDRDHWTSMTGK----LEAQLKS 435
Fly 436 LEQEEIRLRTELELVRTENTELESEQQKAHIQITELLEQNIKLNQELAQTSSSIGGTPEHSPLRP 500
Fly 501 RRHSEDKEEEMLQLMEKLAALQMENAQ----LRDKTDELTIEIE--------------------- 540
Fly 541 -----------------------SLNVELIRSKTKAK--------------KQEKQEKQEDQ--- 565
Fly 566 --ESAATATKRRGDSPSKTHLTEESPRLGKQRKCTEGEQSDASNSGDWLALNSELQRSQSQ---D 625
Fly 626 EELTSLRQRV-AELEEELKA-----------AKEG------------RSLTPESRSKELETSLEQ 666
Fly 667 MQR-AYE------DCEDYWQTKLSEERQLFEKE-------------------------------- 692
Fly 693 --RQIYED--EQH---------ESDKKFTELMEKVREYEE--QFSKDGRLSPIDERDMLEQQYSE 742
Fly 743 ----LEAEAAQL------------RSSSI---QMLEEK------------------------AQE 764
Fly 765 ISSLQSEIEDLRQRLGESVEILTGA----CELTSESVAQLSAEAGKSPASSPISYLWLQSTIQ-- 823
Fly 824 EPAKSL--------ADSKDEATAS-AIELL---------GG------SPSHKTASRNNLTTSETS 864
Fly 865 IFSTTPFESSQSGPSPTN---------SGNSNAYGANP----GPAP---ISKP--KRSQSPQQAA 911
Fly 912 ASEGEIADCET-SSTASGKSF---ESNSKTSCLSHEKCSSPSALKEEL-------------KRLK 959
Fly 960 FFELS-LKEQIKDLSLQRDGLVMELQQLQEARPVLEKAY--ARTTHPTLQQRLNQLELRNRHLQN 1021
Fly 1022 VIKQQQHYTESLMQQSWRQHQVELNDLHSRIETQGVLLADQTQRLQ-------SADILVKDLYVE 1079
Fly 1080 NSHLTATVQRLEQQRARV 1097 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Bsg25D | NP_001260093.1 | SMC_prok_B | <306..545 | CDD:274008 | 69/291 (24%) |
Smc | <428..777 | CDD:224117 | 116/543 (21%) | ||
Spc7_N | <769..937 | CDD:292045 | 48/219 (22%) | ||
GAS | 951..>1053 | CDD:290562 | 25/117 (21%) | ||
Nin | XP_006240220.1 | SMC_prok_B | <388..981 | CDD:274008 | 135/610 (22%) |
CCDC158 | 1045..1998 | CDD:318193 | 75/363 (21%) | ||
Smc | <1433..1672 | CDD:224117 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342047 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003212 | |
OrthoInspector | 1 | 1.000 | - | - | otm46404 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18905 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 5.030 |