DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bsg25D and Nin

DIOPT Version :9

Sequence 1:NP_001260093.1 Gene:Bsg25D / 33757 FlyBaseID:FBgn0000228 Length:1118 Species:Drosophila melanogaster
Sequence 2:XP_006240220.1 Gene:Nin / 299117 RGDID:1306492 Length:2157 Species:Rattus norvegicus


Alignment Length:1448 Identity:330/1448 - (22%)
Similarity:539/1448 - (37%) Gaps:444/1448 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EVSADPYEQKLYQMFRSCET-QCGLLDEKSLLKLCSLLELRDQGSALIASLGGSHQLG-VSFGQF 64
            ||..|.:|.:|.::|.|.:| ..|.|.::.|..||.:|.|.|.|..|..:|...:.|| |.|.||
  Rat     3 EVEQDQHEARLKELFDSFDTLGTGSLGQEELTDLCHVLCLEDVGPVLQQTLLQDNLLGRVHFDQF 67

  Fly    65 KEALL----NFLGSE--FDGNTSSGFIERSLVITDEPLNNTY--------IESPPESSDREVSPK 115
            ||||:    ..|.||  |:.:.|.|...:.:.....||..|:        .:..||:     .||
  Rat    68 KEALILILSRTLSSEEHFEESASVGVSCQQVTQVSVPLLGTHRLTHSLLKKDCSPEA-----QPK 127

  Fly   116 LVVGTKKYGRRSRPQ-----QGIYELSVTD---------------------SDNTDEDQLQQQ-- 152
            .|.|.|:|||||.|:     :...|::|.:                     :..::|.:.:.|  
  Rat   128 YVRGGKRYGRRSLPEFQESGEEFAEVTVLEPLEEEARPSHIPAGDCSEHWKTQRSEEYEAEGQLR 192

  Fly   153 -QNQRSLNG-------------------CDELGVQVQRSSSQSDLPGSRRLRSV-------HTSG 190
             .|...||.                   |::||:      ::......::|.|:       :..|
  Rat   193 FWNPDDLNASHGGSCPPPDWIEEKLQEVCEDLGI------TRDGHLNRKKLVSICEQYGLQNVDG 251

  Fly   191 SKLKRC-ASLPARRKMNSN-------TTGATTSPTAAAKLKQLSIQSQAQHSS--SVESLGHRLA 245
            :.|:.. .||.....|:..       .||.:.:|:|:...:||.     :|.|  |.:..|.|..
  Rat   252 AMLEEVFLSLDPDGTMSVEDFFYGLFKTGKSLTPSASTPYRQLK-----RHLSMQSFDESGRRTT 311

  Fly   246 TNPAPSSEHWRCYHGGRWSCCKDTVTPQQLETISVHSIMEAWELASIPNTRNLLHVLGFDEEEEV 310
            |:.|..|.     .|.|...|.|....|    .||..|::.|:...|.|::.:|..|.|..:..:
  Rat   312 TSSAMMST-----IGFRVFSCLDDGMGQ----ASVERILDTWQEEGIENSQEILKALDFSLDGNI 367

  Fly   311 NLQQLTKALEEELRGI-DGDHEQSNMLRALAALQATELGNYRLAYRQQHEENLKLRADNKAANQR 374
            ||.:||.|||.||... :|.|:     .|||:.:| |:.:......|...|..|||:|...|.:.
  Rat   368 NLTELTLALENELLVTKNGIHQ-----AALASFKA-EIRHLLERVDQVVREKEKLRSDLDKAEKL 426

  Fly   375 VALLAVEVDERHASLEDNSKKQVQQLEQRHASMVREITLRMTNDRDHWTSMTGK----LEAQLKS 435
            .:|:|.|||:.||::|..::..:::|::.:...:..:...:..:|:......||    ||.:::.
  Rat   427 KSLMASEVDDHHAAIERRNEYNLRKLDEEYKERIAALKNELRQEREQILQQVGKQRVELEQEIEK 491

  Fly   436 LEQEEIRLRTELELVRTENTELESEQQKAHIQITELLEQNIKLNQELAQTSSSIGGTPEHSPLRP 500
            .:.||..:|..|.|...||..||:|..:...::.|......||.:.|....:...|..:.|    
  Rat   492 AKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLENVLAEKFGDLDPS---- 552

  Fly   501 RRHSEDKEEEMLQLMEKLAALQMENAQ----LRDKTDELTIEIE--------------------- 540
                  ..|..|| .|:||.::.|..|    |:|:.|||..|:|                     
  Rat   553 ------SAEFFLQ-EERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQNALSEEL 610

  Fly   541 -----------------------SLNVELIRSKTKAK--------------KQEKQEKQEDQ--- 565
                                   |:..||:..:.|.:              |....|||.|.   
  Rat   611 DGHGDGIEQDQEPGSGECNPLNMSIEAELVIEQLKEQHHRDLCHLRLELEDKVRHYEKQLDHTRV 675

  Fly   566 --ESAATATKRRGDSPSKTHLTEESPRLGKQRKCTEGEQSDASNSGDWLALNSELQRSQSQ---D 625
              |....|.|::.:...:| |.::...|..:....:|:.:....:....:...|.::.|.|   |
  Rat   676 ACEKEQVAMKQKYEQGMRT-LEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQMVFD 739

  Fly   626 EELTSLRQRV-AELEEELKA-----------AKEG------------RSLTPESRSKELETSLEQ 666
            ||.|.|::.: .|.|:||||           .:||            ||||.:......|..|..
  Rat   740 EEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQSHQEQLLSL 804

  Fly   667 MQR-AYE------DCEDYWQTKLSEERQLFEKE-------------------------------- 692
            |:: |.|      :..:|.|.:|.|.|:..|.|                                
  Rat   805 MEKHALEKEELRKELSEYHQRELQEGREEMETECNRRVSQIEAQFQADCEKVTERCEQTLQSLEG 869

  Fly   693 --RQIYED--EQH---------ESDKKFTELMEKVREYEE--QFSKDGRLSPIDERDMLEQQYSE 742
              ||..:|  :||         |.|:...|..|...:.||  |..|...|:...|::.||:.:.|
  Rat   870 RYRQELKDLLDQHLEERSQWEFEKDELTQECTEAQEQLEEVLQREKATALARSQEQETLEKTHKE 934

  Fly   743 ----LEAEAAQL------------RSSSI---QMLEEK------------------------AQE 764
                |..|..||            |..|:   ||||.|                        :|:
  Rat   935 RLAILSMEREQLLQDLKDLQNTSERQHSLLSDQMLELKRSQERELREPEHVLCQTGVSEQLGSQQ 999

  Fly   765 ISSLQSEIEDLRQRLGESVEILTGA----CELTSESVAQLSAEAGKSPASSPISYLWLQSTIQ-- 823
            ::.||.|.|..|:.:...:..|..|    ||...:..|::|||..:           ||||::  
  Rat  1000 LARLQVEHEQERREMAGKIAALESAHRVSCERADQEKAEMSAEIRR-----------LQSTVKDL 1053

  Fly   824 EPAKSL--------ADSKDEATAS-AIELL---------GG------SPSHKTASRNNLTTSETS 864
            :.|.||        |.:.:||..: |:.||         .|      ..:|:.|.:.|...:...
  Rat  1054 QQATSLLVLQGGCRATAGEEAEGNGALSLLQQGEQLLEENGDVLISLQKAHERAVKENAKMATEI 1118

  Fly   865 IFSTTPFESSQSGPSPTN---------SGNSNAYGANP----GPAP---ISKP--KRSQSPQQAA 911
            .......:..:.|.:.::         ||:|..: |.|    |.|.   :|.|  ..:|......
  Rat  1119 SRLQQRLKKLEPGSAISSCLEERMTEISGSSREH-AEPVMKRGTATKHFLSDPGDHEAQGLGSTG 1182

  Fly   912 ASEGEIADCET-SSTASGKSF---ESNSKTSCLSHEKCSSPSALKEEL-------------KRLK 959
            .|..:..:|.| .|.||.:.|   |::..|...|.:..|....|:|:|             ||..
  Rat  1183 TSSVQRQECRTEESEASLECFSELENSEDTRTESWDLKSQIIQLQEQLTVLRADCDRASERKRDL 1247

  Fly   960 FFELS-LKEQIKDLSLQRDGLVMELQQLQEARPVLEKAY--ARTTHPTLQQRLNQLELRNRHLQN 1021
            .|::| ||:::|           .|::|.||....:..|  |...:..||:.|..:|:|      
  Rat  1248 LFDISVLKKKLK-----------MLERLPEASSKYKVLYEDAARENACLQEELRLMEMR------ 1295

  Fly  1022 VIKQQQHYTESLMQQSWRQHQVELNDLHSRIETQGVLLADQTQRLQ-------SADILVKDLYVE 1079
                   |.:||             |.:..:..:...|.|:.::::       |.:....::.:|
  Rat  1296 -------YADSL-------------DSNKELTAEVYRLQDEMKKMEEVTGTFLSLENSYDEVKLE 1340

  Fly  1080 NSHLTATVQRLEQQRARV 1097
            |..|:|.|.||:.:...|
  Rat  1341 NEKLSALVLRLQGKMEEV 1358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bsg25DNP_001260093.1 SMC_prok_B <306..545 CDD:274008 69/291 (24%)
Smc <428..777 CDD:224117 116/543 (21%)
Spc7_N <769..937 CDD:292045 48/219 (22%)
GAS 951..>1053 CDD:290562 25/117 (21%)
NinXP_006240220.1 SMC_prok_B <388..981 CDD:274008 135/610 (22%)
CCDC158 1045..1998 CDD:318193 75/363 (21%)
Smc <1433..1672 CDD:224117
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342047
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003212
OrthoInspector 1 1.000 - - otm46404
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18905
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.030

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