DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4ac3 and cyp46a1.3

DIOPT Version :9

Sequence 1:NP_608918.1 Gene:Cyp4ac3 / 33756 FlyBaseID:FBgn0031695 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001027517.1 Gene:cyp46a1.3 / 613109 XenbaseID:XB-GENE-969052 Length:504 Species:Xenopus tropicalis


Alignment Length:540 Identity:134/540 - (24%)
Similarity:254/540 - (47%) Gaps:80/540 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWIALLG-SSLLIGALWLLLRQLNKTYFILSLCKRVRTADGSPLESKVFVVPGKTR----FGNNL 60
            :| ||:| ::||:.||.|:...|...|.             ..:..|...:||..|    .|::.
 Frog     3 LW-ALIGWAALLLLALILICFLLFSGYI-------------HYIHMKYDHIPGPPRDSFFLGHSP 53

  Fly    61 DLLNLTPANIFSYIRESTAKANGQNYI-WNFLFAPEYNI----------VRAEDAEEIFQSTKIT 114
            .:|.|...|:..|          .::: |...:.|...|          |..|..:|:..|.|. 
 Frog    54 TMLRLMKNNLLMY----------DHFLGWVQKYGPVVRINGLHRVIILVVSPEAVKELLMSPKY- 107

  Fly   115 TKNMSYELIR-----PFLGDGLLISID-QKWHTRRKTLTPAFHFNILQSFLSIFKEESKKFI-KI 172
            :|:..|::|.     .|:|.||:...| ..||.:|:.:.|||....|...:..|.|::::.: |:
 Frog   108 SKDKFYDVIANMFGVRFMGKGLVTDRDYDHWHKQRRIMDPAFSRTYLMGLMGPFNEKAEELMEKL 172

  Fly   173 LDKNVG-FELELNQIIPQFTLNNICETALGVKLDDMSEG-NEYRKAIHDFEIVFN--QRMCNPLM 233
            ::|..| .|::::.::.:.||:.|.:.|.|::|:.:::. ..:.|||   .:|..  ..|.||::
 Frog   173 MEKADGKCEIKMHDMLSRLTLDVIGKVAFGMELNSLNDDLTPFPKAI---SLVMKGIVEMRNPMV 234

  Fly   234 FFNWYFFLFGDYKKYSRILRTIHGFSSGIIQRKRQQFKQKQLGQVDEFGKKQRYAMLDTLLAAEA 298
            .::  ....|..:|....:|.:.......|:|:::|.:..:...||        .:...|..|..
 Frog   235 RYS--LAKRGFIRKVQESIRLLRQTGKECIERRQKQIQDGEEIPVD--------ILTQILKGAAM 289

  Fly   299 EGKIDHQGICDEVNTFMFGGYDTTSTSLIFTLLLLALHADVQERCYEELQDLPEDIDEVSMFQFN 363
            |.:.|.:.:.|...||...|.:||:..|.|.::.|..:.::.|:...|:.::.....::......
 Frog   290 EEECDPEILLDNFVTFFIAGQETTANQLSFVVMELGRNPEILEKAQAEIDEVIGSKRDIEYEDLG 354

  Fly   364 ELIHLECVIKESLRLFPSAPIIGRTCIEESVMNGLVLPKNAQISIHIYDIMRDARHFPKPNQFLP 428
            :|.:|..|:||:|||:|:||...|...|:.|::|:.:|:|..|.::.|.:.|..:::..|..|.|
 Frog   355 KLQYLSQVLKETLRLYPTAPGTSRGLTEDMVIDGVKVPENVTIMLNSYIMGRMEQYYSDPLTFNP 419

  Fly   429 ERFLPENSVNRHPFAFVPFSAGPRNCIGQKFGVLEIKVLLAAVI----------RNFKLLPATQL 483
            :||.|:  ..:..:::.|||.|||:||||.|..:|.||::|.::          ::||:|....|
 Frog   420 DRFSPD--APKPYYSYFPFSLGPRSCIGQVFSQMEAKVVMAKLLQRYEFELAEGQSFKILDTGTL 482

  Fly   484 EDLTFENGIVLRTQQNIKVK 503
            ..|   :|::.|.:.....|
 Frog   483 RPL---DGVICRLRPRTSKK 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ac3NP_608918.1 p450 51..504 CDD:278495 122/489 (25%)
cyp46a1.3NP_001027517.1 p450 40..491 CDD:306555 120/479 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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