DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4ac3 and cyp4b1.2

DIOPT Version :10

Sequence 1:NP_608918.1 Gene:Cyp4ac3 / 33756 FlyBaseID:FBgn0031695 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001017348.1 Gene:cyp4b1.2 / 550102 XenbaseID:XB-GENE-963387 Length:515 Species:Xenopus tropicalis


Alignment Length:524 Identity:153/524 - (29%)
Similarity:252/524 - (48%) Gaps:41/524 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWIALLGSSLLIG--------ALWLLLRQLNKTYFILSLCKRVRTA----DGSPLESKVFVVPGK 53
            :|.||....|.:.        ||..::..|.|.|.:.|..:|...|    .|.|.......|...
 Frog     5 LWKALSSPWLSVNIYQIGQFVALLCVVLLLLKAYALYSRGRRFAAALVPFPGPPAHWLYGHVNQF 69

  Fly    54 TRFGNNLDLL----NLTPANIFSYIRESTAKANGQNYIWNFLFAPEYNIVRAEDAEEIFQSTKIT 114
            .|.|.:||.|    |..| |.|.              :|...|.....|...:.|:.:|..:...
 Frog    70 RRDGKDLDRLMVWVNKYP-NAFP--------------LWIGKFFGTLIITDPDYAKVVFGRSDPK 119

  Fly   115 TKNMSYELIRPFLGDGLLISIDQKWHTRRKTLTPAFHFNILQSFLSIFKEESKKFIKILD--KNV 177
            | :..|..:.|::|.||||.....|...|:.:||.||:::|:.::|:..:.:|..:..||  .|.
 Frog   120 T-STGYNFLVPWIGKGLLILSGNTWFQHRRLITPGFHYDVLKPYVSLISDSTKIMLDELDVYSNK 183

  Fly   178 GFELELNQIIPQFTLNNICETALGVKLD-DMSEGNEYRKAIHDFEIVFNQRMCNPLMFFNWYFFL 241
            ...:||.|.:...||::|.:.|.....: ...:.|:|.:|::|...:..||:.......|..:||
 Frog   184 DESVELFQHVSLMTLDSIMKCAFSYHSNCQTDKDNDYIQAVYDLSWLTQQRIRTFPYHSNLIYFL 248

  Fly   242 FGDYKKYSRILRTIHGFSSGIIQRKRQQFKQKQLGQVDEFGKKQRYAMLDTLLAAEAEG--KIDH 304
            .....::.:..|.:|..:..:|.::::..:.|:  ::::..||:....||.||.::.|.  .:.|
 Frog   249 SPHGFRFRKACRIVHLHTDKVIGQRKKLLESKE--ELEKVQKKRHLDFLDILLCSKDENGQGLSH 311

  Fly   305 QGICDEVNTFMFGGYDTTSTSLIFTLLLLALHADVQERCYEELQDLPEDIDEVSMFQFNELIHLE 369
            :.:..||:||||.|:||||:.:.:.|..:|.|.:.|::|.||:.:...:...:.....|.:.:..
 Frog   312 EDLRAEVDTFMFEGHDTTSSGISWILYCMATHPEHQQKCREEISEALGERQTMEWDDLNRMPYTT 376

  Fly   370 CVIKESLRLFPSAPIIGRTCIEE-SVMNGLVLPKNAQISIHIYDIMRDARHFPKPNQFLPERFLP 433
            ..|||||||:|..|.:.|...:. :..:|..||....:|:.||.|.|:...:..|..|.|.||.|
 Frog   377 MCIKESLRLYPPVPSVSRELAKPITFHDGRSLPAGMLVSLQIYAIHRNPNVWKDPEIFDPLRFSP 441

  Fly   434 ENSVNRHPFAFVPFSAGPRNCIGQKFGVLEIKVLLAAVIRNFKLLPATQLEDLTFENGIVLRTQQ 498
            |||..||..|||||:|||||||||.|.:.|:||.:|..::.|:|.|......|. :..:|||::.
 Frog   442 ENSSKRHSHAFVPFAAGPRNCIGQNFAMNEMKVAVALTLKRFELSPDLSKPPLK-QPQLVLRSKN 505

  Fly   499 NIKV 502
            .|.|
 Frog   506 GIHV 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ac3NP_608918.1 CYP4 87..502 CDD:410721 128/420 (30%)
cyp4b1.2NP_001017348.1 CYP4B-like 76..510 CDD:410771 136/453 (30%)

Return to query results.
Submit another query.