DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4ac3 and cyp26a1

DIOPT Version :10

Sequence 1:NP_608918.1 Gene:Cyp4ac3 / 33756 FlyBaseID:FBgn0031695 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_571221.2 Gene:cyp26a1 / 30381 ZFINID:ZDB-GENE-990415-44 Length:492 Species:Danio rerio


Alignment Length:543 Identity:116/543 - (21%)
Similarity:208/543 - (38%) Gaps:126/543 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LWLLLRQLNKTYFILSLCKRVRTADGSPLESKVFVVPGKTRFGNNLDLLNLTPANIFSYIRESTA 79
            ||.:|           :.:||.....|||......:|   ..|..|.|:         ..|....
Zfish    27 LWEML-----------MIRRVDPNCRSPLPPGTMGLP---FIGETLQLI---------LQRRKFL 68

  Fly    80 KANGQNY--IW-NFLFA-PEYNIVRAEDAEEIFQSTKITTKNMSYELIRPFLGDGLLISIDQKWH 140
            :...|.|  |: ..||. |...::.|::..:|...............:|..||...|.::....|
Zfish    69 RMKRQKYGCIYKTHLFGNPTVRVMGADNVRQILLGEHKLVSVQWPASVRTILGSDTLSNVHGVQH 133

  Fly   141 -TRRKTLTPAFHFNILQSFLSIFKEESKKFI-KILDKN---------------------VGFELE 182
             .::|.:..||..:.|:.::.:.::|.|..| :.|.|:                     :|||.|
Zfish   134 KNKKKAIMRAFSRDALEHYIPVIQQEVKSAIQEWLQKDSCVLVYPEMKKLMFRIAMRILLGFEPE 198

  Fly   183 L-----NQIIPQF--TLNNICETALGVKLDDMSEGNEYRKAIHDFEIVFNQRMCNPLMFFNWYFF 240
            .     .:::..|  .:.|:....:.|....:..|...|..||                      
Zfish   199 QIKTDEQELVEAFEEMIKNLFSLPIDVPFSGLYRGLRARNFIH---------------------- 241

  Fly   241 LFGDYKKYSRILRTIHGFSSGIIQRKRQQFKQKQLGQVDEFGKKQRYAMLDTL-LAAEAEGKIDH 304
                    |:|...|                :|:: |.|:...:|:|.  |.| |..|...:.|.
Zfish   242 --------SKIEENI----------------RKKI-QDDDNENEQKYK--DALQLLIENSRRSDE 279

  Fly   305 ----QGICDEVNTFMFGGYDTTSTSLIFTLLLLALHADVQERCYEELQDLPE-----DIDEVSMF 360
                |.:.:.....:|||::||:::....::.|.|:.:|.::..||:|:..|     ....:||.
Zfish   280 PFSLQAMKEAATELLFGGHETTASTATSLVMFLGLNTEVVQKVREEVQEKVEMGMYTPGKGLSME 344

  Fly   361 QFNELIHLECVIKESLRLFPSAPIIGRTCIEESVMNGLVLPKNAQISIHIYDIMRDARHFPKPNQ 425
            ..::|.:..|||||:||:.|..|...|..::...:||..:||...:...|.|....|..||..::
Zfish   345 LLDQLKYTGCVIKETLRINPPVPGGFRVALKTFELNGYQIPKGWNVIYSICDTHDVADVFPNKDE 409

  Fly   426 FLPERFLPENSVNRHPFAFVPFSAGPRNCIGQKFGVLEIKVLLAAVIRNFKLL----PATQLEDL 486
            |.||||:.:...:...|.::||..|.|.|:|::|..:.:|:.|..:.::...:    |.      
Zfish   410 FQPERFMSKGLEDGSRFNYIPFGGGSRMCVGKEFAKVLLKIFLVELTQHCNWILSNGPP------ 468

  Fly   487 TFENGIVLRTQQNIKVKFEARVK 509
            |.:.|..:....|:..||.:.|:
Zfish   469 TMKTGPTVYPVDNLPTKFTSYVR 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ac3NP_608918.1 CYP4 87..502 CDD:410721 98/460 (21%)
cyp26a1NP_571221.2 CYP26A1 55..486 CDD:410731 104/494 (21%)

Return to query results.
Submit another query.