DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4ac3 and cyp-35A4

DIOPT Version :9

Sequence 1:NP_608918.1 Gene:Cyp4ac3 / 33756 FlyBaseID:FBgn0031695 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_504124.1 Gene:cyp-35A4 / 183622 WormBaseID:WBGene00016786 Length:494 Species:Caenorhabditis elegans


Alignment Length:545 Identity:117/545 - (21%)
Similarity:202/545 - (37%) Gaps:137/545 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWIALLGSSLLIGALWLLLRQLNKT--------------------YFILSLCKRVRTADGSPLES 45
            |::.|..|::|   .||::||..|.                    |::.:....|.|.|      
 Worm     1 MFVILFISAIL---SWLIVRQYQKVSRLPPGPVSLPLIGNLPQIFYYLWTTGSIVSTLD------ 56

  Fly    46 KVFVVPGKTRFGNNLDLL--NLTPANIFSY-IRESTAKANGQNYIWNFLFAPEYNIVRAEDAEEI 107
             :|    :.|:||...|.  .|...:|..| |.......||..|...| .||....:|       
 Worm    57 -LF----RKRYGNIFTLWVGPLPHVSIADYEISHEVFVKNGSKYADKF-HAPVMQDIR------- 108

  Fly   108 FQSTKITTKNMSYELIRPFLGDGLLISIDQKW-HTRRKTLTPAFHFNILQSF--LSIFKEESKKF 169
                    |:|           |::::....| |.||.:         ||:|  :.:.|:     
 Worm   109 --------KDM-----------GIMVTNGDHWQHMRRFS---------LQTFRNMGVGKD----- 140

  Fly   170 IKILDKNVGFELE----------LNQIIP-------QFTLNNICETALGVKLDDMSEGNEYRKAI 217
              |::..:..||:          :|.:..       :.|:.:|..:.|..|..|.:..:|:.|.|
 Worm   141 --IMETKIMQELDARCAEIDTSAMNGVTVTQASEFFELTVGSIINSILVGKRFDATTKHEFLKII 203

  Fly   218 HDFEIVFNQRMCNPLMFFNWYF--FLFGDYKKYSRILRTIHGFSSGIIQRKRQQFKQKQLGQ--V 278
            ...:..........:|...|..  |....|...|........||:....::..|.|.   |:  :
 Worm   204 ETMDASIETASFFDMMVPVWILKTFFKHRYDNLSDAFEVSKAFSAAEAIKRVDQIKS---GRYFI 265

  Fly   279 DEFGKKQRYAMLDTLLAAEAEGKIDHQGICDEVN----TFMFG-----GYDTTSTSLIFTLLLLA 334
            || ...|.|.  |..|.     ||:.:|.|.:.|    ..|.|     |.:||:|:||.....|.
 Worm   266 DE-NNLQDYT--DAFLL-----KIEKEGQCQDFNMETLKTMIGDLWITGQETTTTTLISGFNQLL 322

  Fly   335 LHADVQERCYEELQDLPED-IDEVSMFQFNELIHLECVIKESLRLFPSAPIIG----RTCIEESV 394
            ||.:|..:..|||..:.|: ...:|:.......:|..:|.|..|   .|.|:.    :...|.:.
 Worm   323 LHPEVMVKAREELMKVTENGSRSLSLTDRASTPYLNAMIGEIQR---HASILNVNFWKINKEFTY 384

  Fly   395 MNGLVLPKNAQISIHIYDIMRDARHFPKPNQFLPERFL-PENSVNRHPFAFVPFSAGPRNCIGQK 458
            |.|..:...|.::..:..:..:...|..|.:|.|||:: .||.:.:    .:||..|.|:|:|:.
 Worm   385 MGGHPVDAGALVTAQLGTLHVNETVFENPLKFDPERYIRDENLLQK----VIPFGVGKRSCLGES 445

  Fly   459 FGVLEIKVLLAAVIRNFKLLPATQL 483
            ....|:.::...::..:|...:::|
 Worm   446 LARAELYLIFGNLLLRYKFESSSKL 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ac3NP_608918.1 p450 51..504 CDD:278495 103/475 (22%)
cyp-35A4NP_504124.1 p450 26..465 CDD:299894 107/510 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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