DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4ac3 and Cyp26a1

DIOPT Version :9

Sequence 1:NP_608918.1 Gene:Cyp4ac3 / 33756 FlyBaseID:FBgn0031695 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_569092.2 Gene:Cyp26a1 / 154985 RGDID:620161 Length:497 Species:Rattus norvegicus


Alignment Length:505 Identity:112/505 - (22%)
Similarity:210/505 - (41%) Gaps:63/505 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ALLGSSLLIGALWLLLRQLNKTYFILSL------CKRVRTADGS---PLESKVFVVPGKTRFGNN 59
            |||.|:|....|.|||       |:.:|      |  |.:.|.|   ||.......|   .||..
  Rat     5 ALLASALCTFVLPLLL-------FLAALKLWDLYC--VSSRDRSCALPLPPGTMGFP---FFGET 57

  Fly    60 LDLLNLTPANIFSYIRESTAKANGQNYIW-NFLFA-PEYNIVRAEDAEEIFQSTKITTKNMSYEL 122
            |.:       :....:....|.....:|: ..||. |...::.|::...|...............
  Rat    58 LQM-------VLQRRKFLQMKRRKYGFIYKTHLFGRPTVRVMGADNVRRILLGEHRLVSVHWPAS 115

  Fly   123 IRPFLGDGLLISIDQKWH-TRRKTLTPAFHFNILQSFLSIFKEE----SKKFIKILDKNVGFELE 182
            :|..||.|.|.::....| .|:|.:..||:...||.::.:..||    .::::...::.:....|
  Rat   116 VRTILGAGCLSNLHDSSHKQRKKVIMQAFNREALQCYVPVIAEEVSGCLEQWLSCGERGLLVYPE 180

  Fly   183 LNQIIPQFTLNNICETALGVKLDDMSEGNEYRKAIHDFEIVFNQRMCNPL--MFFNWYFFLFGDY 245
            :.:::.:..:..:    ||.:......|.:.::.:..||.:.......|:  .|...|       
  Rat   181 VKRLMFRIAMRIL----LGCEPGPAGGGEDEQQLVEAFEEMTRNLFSLPIDVPFSGLY------- 234

  Fly   246 KKYSRILRTIHGFSSGIIQRKRQQFKQKQLGQVDEFGKKQRYAMLDTLLAAEAEGKIDHQGICDE 310
             :..:....||   :.|.:..|.:.::.|..:.|...|.....:::.  :.|...::|.|.:...
  Rat   235 -RGVKARNLIH---ARIEENIRAKIRRLQAAEPDAGCKDALQLLIEH--SWERGERLDMQALKQS 293

  Fly   311 VNTFMFGGYDTTSTSLIFTLLLLALHADVQERCYEELQD-----LPEDIDEVSMFQFNELIHLEC 370
            ....:|||::||:::....:..|.|:..|.::..||::.     .....|::.|....:|.::.|
  Rat   294 STELLFGGHETTASAATSLITYLGLYPHVLQKVREEIKSKGLLCKSHHEDKLDMETLEQLKYIGC 358

  Fly   371 VIKESLRLFPSAPIIGRTCIEESVMNGLVLPKNAQISIHIYDIMRDARHFPKPNQFLPERFLPEN 435
            ||||:|||.|..|...|..::...:||..:||...:...|.|....|..|....:|.|:||...:
  Rat   359 VIKETLRLNPPVPGGFRVALKTFELNGYQIPKGWNVIYSICDTHDVADSFTNKEEFNPDRFTSLH 423

  Fly   436 SVNRHPFAFVPFSAGPRNCIGQKFGVLEIKVLLAAVIR--NFKLL--PAT 481
            ..:...|:|:||..|.|:|:|::|..:.:|:....:.|  :::||  |.|
  Rat   424 PEDTSRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARRCDWQLLNGPPT 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ac3NP_608918.1 p450 51..504 CDD:278495 95/449 (21%)
Cyp26a1NP_569092.2 p450 43..491 CDD:299894 97/458 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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