DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4ac3 and cyp4v2.1

DIOPT Version :9

Sequence 1:NP_608918.1 Gene:Cyp4ac3 / 33756 FlyBaseID:FBgn0031695 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_002934446.1 Gene:cyp4v2.1 / 100485929 XenbaseID:XB-GENE-22069503 Length:523 Species:Xenopus tropicalis


Alignment Length:550 Identity:173/550 - (31%)
Similarity:278/550 - (50%) Gaps:86/550 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWIA-------LLGSSLLIGAL------WLLLRQL------------------NKTYFILSLCKR 34
            :|:|       ||..|:| .||      |.|::.:                  |...|.|.:|:.
 Frog    11 VWVAAAVVLLTLLALSIL-PALQDYVRKWKLMKPIPGPGPNYPIVGDALFLKPNGGDFFLQMCEF 74

  Fly    35 VRTADGSPLESKVFVVPGKTRFGNNLDLLNLTPANIFSYIRESTAKANGQNYIWNFLFAPEYNIV 99
            ..:....|| .|:::.|                                         .|...:.
 Frog    75 TESFRSEPL-IKIWIGP-----------------------------------------IPFIIVY 97

  Fly   100 RAEDAEEIFQSTKITTKNMSYELIRPFLGDGLLISIDQKWHTRRKTLTPAFHFNILQSFLSIFKE 164
            .|:..|.|..::|...|..||:.:.|:||.|||.|..:||.:|||.:||.|||.||..||.:..|
 Frog    98 HADTVEPILSTSKHMDKAYSYKFLHPWLGKGLLTSTGEKWRSRRKMITPTFHFAILSEFLEVMNE 162

  Fly   165 ESKKFIKILDKNV-GFELELNQIIPQFTLNNICETALGVKLDDMS-EGNEYRKAIHDFEIVFNQR 227
            :||..::.|.|:| |........:....|:.|.|||:|.|:...| ..:||..||:....:..:|
 Frog   163 QSKILVEKLQKHVDGESFNCFMDVTLCALDIISETAMGRKIQAQSNRDSEYVHAIYKMSDIIQRR 227

  Fly   228 MCNPLMFFNWYFFLFGDYKKYSRILRTIHGFS-SGIIQR-----KRQQFKQKQLGQVDEFGK-KQ 285
            ...|.::.::::....|.|::.:.|:.:|.|: ..|::|     |..:.|::......|..| |:
 Frog   228 QKMPWLWLDFFYAYLKDGKEHDKNLKILHAFTDKAILERAEELKKMGEQKKEHCDSDPESDKPKK 292

  Fly   286 RYAMLDTLLAA--EAEGKIDHQGICDEVNTFMFGGYDTTSTSLIFTLLLLALHADVQERCYEELQ 348
            |.|.||.||.|  :|..|:.:..|.:||:||||.|:|||:.:|.::|.||..|.:.|.:.::||.
 Frog   293 RSAFLDMLLMATDDAGNKMSYMDIREEVDTFMFEGHDTTAAALNWSLFLLGSHPEAQRQVHKELD 357

  Fly   349 DLPEDIDE-VSMFQFNELIHLECVIKESLRLFPSAPIIGRTCIEESVMNGLVLPKNAQISIHIYD 412
            ::....|. |:|....:|.:||.||||:||::||.|...||..|:..:.|..:||...:.|..|.
 Frog   358 EVFGKSDRPVTMDDLKKLRYLEAVIKEALRIYPSVPFFARTVTEDCSIRGFHVPKGVNVVIIPYA 422

  Fly   413 IMRDARHFPKPNQFLPERFLPENSVNRHPFAFVPFSAGPRNCIGQKFGVLEIKVLLAAVIRNFKL 477
            :.||..:||:|.:|.||||.|||:..|:|:|::|||||.||||||:|.::|.||:|::::||:.:
 Frog   423 LHRDPEYFPEPEEFRPERFFPENASGRNPYAYIPFSAGLRNCIGQRFALMEEKVVLSSILRNYWV 487

  Fly   478 LPATQLEDLTFENGIVLRTQQNIKVKFEAR 507
            ..:.:.|||.....::||.|..:.:|.:.|
 Frog   488 EASQKREDLCLLGDLILRPQDGMWIKLKNR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ac3NP_608918.1 p450 51..504 CDD:278495 154/464 (33%)
cyp4v2.1XP_002934446.1 p450 45..509 CDD:365848 161/505 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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