DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4ac1 and cyp4v2b

DIOPT Version :10

Sequence 1:NP_608916.1 Gene:Cyp4ac1 / 33754 FlyBaseID:FBgn0031693 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001073465.2 Gene:cyp4v2b / 562008 ZFINID:ZDB-GENE-061103-88 Length:510 Species:Danio rerio


Alignment Length:538 Identity:184/538 - (34%)
Similarity:290/538 - (53%) Gaps:69/538 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLGIPILLAVLTLLLKHINKTYFILSLTKRVRTEDGSPLE------SKVAIMPGKTR----FGNN 59
            :||| :..|||.|||  .:..|              :||:      :::..:||...    .||.
Zfish     9 ILGI-LFTAVLLLLL--ASTAY--------------NPLKNYIGKWNEMRPIPGMAGAYPIIGNA 56

  Fly    60 LDILNFTPASVFNFVRESTAKAKGQNYLWYFLYAPMYNV-VRP---------EEAEEVFQSTKLI 114
            |. ........||.:.|.|.:.:         :.|:..| |.|         |..|.|..:::.:
Zfish    57 LQ-FKTNAGDFFNQIIEGTNENR---------HLPLAKVWVGPVPFLILYHAENIEVVLSNSRHL 111

  Fly   115 TKNVVYELIRPFLGDGLLISTDHKWHSRRKALTPAFHFNVLQSFLGIFKEECKKFLNVLEKNLDA 179
            .|:..|..:.|:||.|||.||..||.:|||.|||.|||::|..||.:..|:....:..::|..|.
Zfish   112 DKSYSYRFLHPWLGTGLLTSTGEKWRNRRKMLTPTFHFSILSDFLEVMNEQTDILIQKMQKLEDG 176

  Fly   180 ELELNQVIPPF---------TLNNICETALGVKLDDMSEG-NEYRKAIHAIEEVLIQRVCNPLMY 234
            |        ||         .|:.|||||:|.|:...|.. :||.::::.:.:::.:|...|.::
Zfish   177 E--------PFNCFNFITLCALDIICETAMGKKIYAQSNADSEYVQSVYKMSDIITKRQRAPWLW 233

  Fly   235 YNWYFFVYGDYRKHLQNLRIVHDFSSRIIERKRQQFQQKQLGEVDEFGRKQRYAMLDTLLAA--E 297
            .:|.:....:.::|.:.|:|:|.|::.:| |:|.:|...:.....:.|.::|.|.||.||..  |
Zfish   234 PDWIYNKLKEGKEHAKRLKILHSFTANVI-RERAEFMSSEPDSDSDQGGRKRQAFLDMLLKTTYE 297

  Fly   298 ADGQIDHQGICDEVNTFMFEGYDTTSTCLIFTLLMLALHEDVQKKCYEEVENLPEDSD-DISMFQ 361
            ...::.|:.|.:||:||||||:|||:..:.:.|.::..|.:|||....|::.:...|: .:.:..
Zfish   298 NGQKLSHEDIQEEVDTFMFEGHDTTAASMNWALHLIGSHPEVQKAVQAELQEVFGSSERHVGVED 362

  Fly   362 FNKLVYLECVIKESLRMFPSVPFIGRQCVEETVVNGMVMPKDTQISIHIYDIMRDPRHFPKPDLF 426
            ..||.|||||||||||:|||||...|...|...:||..:||.....|..|.:.||||:||:|:.|
Zfish   363 LKKLRYLECVIKESLRIFPSVPLFARSICEACHINGFKVPKGVNAVIIPYALHRDPRYFPEPEEF 427

  Fly   427 QPDRFLPENTVNRHPFAYVPFSAGQRNCIGQKFAILEMKVLLAAVIRNFKLLPATQLEDLTFENG 491
            ||:||:|||:..|||:||:|||||.||||||:||::|.||:||.::|:|.:......|:|.....
Zfish   428 QPERFMPENSKGRHPYAYIPFSAGPRNCIGQRFAMMEEKVVLATILRHFDVEACQSREELRPLGE 492

  Fly   492 IVLRTQENIKVKLSKRVK 509
            ::||.::.|.:||.:|.|
Zfish   493 LILRPEKGIWIKLQRRSK 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ac1NP_608916.1 CYP4 83..502 CDD:410721 159/441 (36%)
cyp4v2bNP_001073465.2 None

Return to query results.
Submit another query.