DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4ac1 and cyp26a1

DIOPT Version :10

Sequence 1:NP_608916.1 Gene:Cyp4ac1 / 33754 FlyBaseID:FBgn0031693 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_012822016.1 Gene:cyp26a1 / 548901 XenbaseID:XB-GENE-855583 Length:492 Species:Xenopus tropicalis


Alignment Length:500 Identity:124/500 - (24%)
Similarity:211/500 - (42%) Gaps:93/500 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LAVLTLLLKHINKTYFILSLTKRVRTEDGS---PLESKVAIMPGKTRFGNNLDILNFTPASVFNF 73
            ||:..|||....|.:.:..|:::    |.|   ||......:|   .||..|.::         .
 Frog    14 LALPVLLLLTAAKLWEVYCLSRK----DASCRNPLPPGTMGLP---FFGETLQMV---------L 62

  Fly    74 VRESTAKAK----GQNYLWYFLYAPMYNVVRPEEAEEVFQST-KLITKNVVYELIRPFLGDGLLI 133
            .|....:.|    |:.|..:...:|...|...|...::.... ||::.:.... :|..||.|.|.
 Frog    63 QRRKFLQVKRRKYGRIYKTHLFGSPTVRVTGAENVRQILLGEHKLVSVHWPAS-VRTILGAGCLS 126

  Fly   134 S---TDHKWHSRRKALTPAFHFNVLQSFLGIFKEECKKFLNVLEKNLDAELELNQVIPPFTLNNI 195
            :   ::||:  .:|.:..||....|.:::.:.:||.::.:|:..:: |:.:.:...|........
 Frog   127 NLHDSEHKY--TKKVIMQAFSREALANYVPLMEEELRRSVNLWLQS-DSCVLVYPAIKRLMFRIA 188

  Fly   196 CETALGVKLDDMSEGNEYRKA-IHAIEEVLIQRVCNPL-MYYNWYFFVYGDYRKHLQNLRIVHDF 258
            ....||  .|....|.|..:. :.|.||:.......|: :.::      |.|| .|:...|:|  
 Frog   189 MRLLLG--CDPQRLGREQEETLLEAFEEMTRNLFSLPIDVPFS------GLYR-GLRARNIIH-- 242

  Fly   259 SSRIIERKRQQFQQKQLGEVDEFGRKQRYAMLDTLLAAEADGQ--------IDH----------Q 305
             ::|.|..:::.|:                        |.|||        |||          |
 Frog   243 -AQIEENIKEKLQR------------------------EPDGQCRDALQLLIDHSRRTGEPVNLQ 282

  Fly   306 GICDEVNTFMFEGYDTTSTCLIFTLLMLALHEDVQKKCYEEVE------NLPEDSDDISMFQFNK 364
            .:.:.....:|.|:.||::........||||:||.:|..:|:|      |.||:..::|:....:
 Frog   283 ALKESATELLFGGHGTTASAATSLTTFLALHKDVLEKVRKELESQGLLSNKPEEKKELSIEVLQQ 347

  Fly   365 LVYLECVIKESLRMFPSVPFIGRQCVEETVVNGMVMPKDTQISIHIYDIMRDPRHFPKPDLFQPD 429
            |.|..|||||:||:.|.|....|..::..|:||..:||...:...|.|...:...||..|.|.||
 Frog   348 LKYTSCVIKETLRLSPPVAGGFRVALKTFVLNGYQIPKGWNVIYSIADTHGEAELFPDKDEFNPD 412

  Fly   430 RFLPENTVNRHPFAYVPFSAGQRNCIGQKFAILEMKVLLAAVIRN 474
            |||.....:...|.::||..|.|.|:|::||.:.:||.:..:.||
 Frog   413 RFLTPLPGDSSRFGFIPFGGGVRCCVGKEFAKILLKVFIVELCRN 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ac1NP_608916.1 CYP4 83..502 CDD:410721 106/421 (25%)
cyp26a1XP_012822016.1 cytochrome_P450 55..485 CDD:477761 110/451 (24%)

Return to query results.
Submit another query.