DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4ac1 and cyp46a1.4

DIOPT Version :10

Sequence 1:NP_608916.1 Gene:Cyp4ac1 / 33754 FlyBaseID:FBgn0031693 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_956773.1 Gene:cyp46a1.4 / 393451 ZFINID:ZDB-GENE-040426-1224 Length:444 Species:Danio rerio


Alignment Length:448 Identity:110/448 - (24%)
Similarity:207/448 - (46%) Gaps:55/448 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 WYFLYAPMYNVVR----------PEEAEEVFQSTKLITKNVVYELI-----RPFLGDGLLISTDH 137
            |...|.|:|.:..          ||..:.:..|.|......||..:     :.|||.||:.:.||
Zfish    15 WAEKYGPVYRINSLHYIAIVVHCPEATKTILMSPKYTKDPFVYRRLFNLFGKRFLGYGLITAVDH 79

  Fly   138 K-WHSRRKALTPAFHFNVLQSFLGIFKEECKKFLNVLEK--NLDAELELNQVIPPFTLNNICETA 199
            . |:.:|:.:.|||..:.|:|.:..|.|..::.::.||:  |......::.::...||:.||:.|
Zfish    80 DIWYRQRRIMDPAFSSSYLRSLISTFDEMSERLMDKLEEMANNKTPAVMHDLVNCVTLDVICKVA 144

  Fly   200 LGVKLDDMSE-GNEYRKAIHAIEEVLIQRVCNP---LMYYNWYFFVYGDYRKHLQNLRIVHDFSS 260
            .||.|:.::: .:.::.|:......:...:.:|   |...||         |.::.:|    .::
Zfish   145 FGVDLNFLTQKDSPFQNAVELCLNGMTVDLRDPFFRLFPKNW---------KLIKQIR----DAA 196

  Fly   261 RIIERKRQQFQQKQLGEVDEFGRKQRYAMLDTLLAAE---ADGQIDHQGICDEVNTFMFEGYDTT 322
            .::.:..:::.|.:...|.......:..:...|.:||   .:...|.:.:.|...||...|.:||
Zfish   197 ELLRKTGEKWIQNRKTAVKNGEDVPKDILTQILKSAEEENVNNTDDLEQMLDNFVTFFIAGQETT 261

  Fly   323 STCLIFTLLMLALHEDVQKKCYEEVENLPEDSDDISMFQFNKLVYLECVIKESLRMFPSVPFIGR 387
            :..|.|.::.|..:.::.|:...||:.:.....:||.....|..||..|:||:||::|:.|...|
Zfish   262 ANQLSFAIMALGRNPEIYKRAKAEVDEVLGTKREISNEDLGKFTYLSQVLKETLRLYPTAPGTNR 326

  Fly   388 QCVEETVVNGMVMPKDTQISIHIYDIMRDPRHFPKPDLFQPDRFLPENTVN--RHPFAYVPFSAG 450
            ...|:.:::|:.:|....:....|...|..:.|..|..|.|:||    .||  :..:.|.||:.|
Zfish   327 WLHEDMIIDGIKIPGGCSVMFSSYVSQRLEKFFKDPLKFDPERF----DVNAPKPYYCYFPFALG 387

  Fly   451 QRNCIGQKFAILEMKVLLAAVIRNFK--LLPATQLE-----DLTFENGIVLRTQENIK 501
            .|.|:||.|:.:|.||:||.:::.|:  |:|....:     .|..::|::.    |||
Zfish   388 PRTCLGQVFSQMEAKVVLAKLLQRFEFSLVPGQSFDIKDTGTLRPKSGVIC----NIK 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ac1NP_608916.1 CYP4 83..502 CDD:410721 110/448 (25%)
cyp46a1.4NP_956773.1 CYP46A1-like 9..438 CDD:410706 107/439 (24%)

Return to query results.
Submit another query.