DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tkv and AT4G23050

DIOPT Version :9

Sequence 1:NP_787990.1 Gene:tkv / 33753 FlyBaseID:FBgn0003716 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_849424.1 Gene:AT4G23050 / 828404 AraportID:AT4G23050 Length:736 Species:Arabidopsis thaliana


Alignment Length:368 Identity:94/368 - (25%)
Similarity:156/368 - (42%) Gaps:95/368 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 KQPR-----LINSMCNSQLSPLSQLVEQSSG---SGSGLPLLVQRTIAKQ--------------- 265
            |.||     |::.|..:::|.|:..:|.:..   |...||:|...:..:|               
plant   396 KPPRGLESGLVSGMRGTKMSDLNGEIEDAWNTRLSVDPLPILGVNSGRQQSPVNQRNNRLVTDSS 460

  Fly   266 -------IQMVRLVGKGRYGEVWLAKWRDERVAVKTFF-------TTEEASWFRETEIYQTVLMR 316
                   :|:...||:|.:..|....|....||:|.:|       |..|..  :|..|.:.  :|
plant   461 CEIRWEDLQLGEEVGRGSFAAVHRGVWNGSDVAIKVYFDGDYNAMTLTECK--KEINIMKK--LR 521

  Fly   317 HDNILGFIAADIKGNGSWTQMLLITDYHEMGSLHDYL--SMSVINPQKLQLLAFSLASGLAHLHD 379
            |.|:|.|:.|......|    .:|.:|...|||...|  :...::.::...:|..:|.|:.:||.
plant   522 HPNVLLFMGAVCTEEKS----AIIMEYMPRGSLFKILHNTNQPLDKKRRLRMALDVARGMNYLHR 582

  Fly   380 EIFGTPGKPAIAHRDIKSKNILVKRNGQCAIADFGLAVKYNSELDVIHIAQNPRVGTRRYMAPEV 444
            .      .|.|.|||:||.|:||.:|....:.||||:...|:..    ::.....||.::|||||
plant   583 R------NPPIVHRDLKSSNLLVDKNWNVKVGDFGLSKWKNATF----LSTKSGKGTPQWMAPEV 637

  Fly   445 LSQQLDPKQFEEFKRADMYSVGLVLWEMTRRCYTPVSGTKTTTCEDYALPYHDVVPSDPTFEDMH 509
            |  :.:|..    ::.|::|.|::|||:            .||          :||.|..  :..
plant   638 L--RSEPSN----EKCDVFSFGVILWEL------------MTT----------LVPWDRL--NSI 672

  Fly   510 AVVCVKGF---RPPIPSRWQEDDVLATVSKIMQECWHPNPTVR 549
            .||.|.||   |..:|     :.:...::.|:|:||..:|..|
plant   673 QVVGVVGFMDRRLDLP-----EGLNPRIASIIQDCWQTDPAKR 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tkvNP_787990.1 Activin_recp 81..171 CDD:279413
GS 238..266 CDD:197743 8/52 (15%)
S_TKc 267..557 CDD:214567 81/295 (27%)
STKc_BMPR1 270..562 CDD:271046 80/292 (27%)
AT4G23050NP_849424.1 PAS 92..202 CDD:389822
STKc_MAP3K-like 474..720 CDD:270901 80/290 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.