DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tkv and acvr1

DIOPT Version :10

Sequence 1:NP_787990.1 Gene:tkv / 33753 FlyBaseID:FBgn0003716 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001017357.1 Gene:acvr1 / 550111 XenbaseID:XB-GENE-478850 Length:512 Species:Xenopus tropicalis


Alignment Length:536 Identity:229/536 - (42%)
Similarity:323/536 - (60%) Gaps:66/536 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 SGPGSEGYEDADNEKSKTVENARSLTCYCDG-SCPDNVSNGTCETRPGGSCFSAVQQLYDETTGM 120
            |.|..|      :|:.|.  ||....|.|:| ||      |:.:...|..||:::    ....|:
 Frog    17 SSPSME------DEEMKL--NAGQYKCVCEGMSC------GSGDHCYGQQCFASL----SNNDGV 63

  Fly   121 YEEERTYGCMPPEDNGGFLMCKVAAVPHLHGKNIVCCDKEDFCNRDLYPTYTPKLT-----TPAP 180
            ...::  ||....:.|. :.||   .|....:.:.|| :.|.||.::    |.|:|     |...
 Frog    64 LVSQK--GCFQVYEQGK-MTCK---TPPSQDQAVECC-QSDLCNMNI----TVKITDLTGRTKQG 117

  Fly   181 DLPVSSESLHTLAVFGSIIISLSVFMLIVASLCFTYKRREKLRKQPRL---------INSMCNSQ 236
            :.|  :.|:.||.:|   |::..:.:::::.|.....|:.:.|....|         |:.:..|.
 Frog   118 EAP--NYSVETLTIF---ILAPVIVLVVLSVLAVLIFRKIQQRHMQMLSNRDAEYGTIDGLIASN 177

  Fly   237 L--SPLSQLVEQS--SGSGSGLPLLVQRTIAKQIQMVRLVGKGRYGEVWLAKWRDERVAVKTFFT 297
            :  |.|:::::.|  ||||||||.|||||:|:||.:...||||||||||...|:.|.||||.|.:
 Frog   178 VGDSTLAEMLDHSCTSGSGSGLPFLVQRTVARQITLAECVGKGRYGEVWRGLWQGESVAVKIFSS 242

  Fly   298 TEEASWFRETEIYQTVLMRHDNILGFIAADIKGNGSWTQMLLITDYHEMGSLHDYLSMSVINPQK 362
            .:|.|||||||:|.|||:||:|||||||:|:....|.||:.|||.|||:|||:|||.::.::...
 Frog   243 RDEKSWFRETELYNTVLLRHENILGFIASDMTSRNSSTQLWLITHYHELGSLYDYLQVTTLDSVT 307

  Fly   363 LQLLAFSLASGLAHLHDEIFGTPGKPAIAHRDIKSKNILVKRNGQCAIADFGLAVKYNSELDVIH 427
            ...:..|:||||||||.|||||.|||||:|||:||||:|||:||||.|||.||||.::...:.:.
 Frog   308 CLRIVLSIASGLAHLHVEIFGTQGKPAISHRDLKSKNVLVKKNGQCCIADLGLAVMHSQTTNQLD 372

  Fly   428 IAQNPRVGTRRYMAPEVLSQQLDPKQFEEFKRADMYSVGLVLWEMTRRCYTPVSGTKTTTCEDYA 492
            :..||||||:||||||||.:.:....|:.:||.|:|:.||||||:.||.      ......|:|.
 Frog   373 VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIYAFGLVLWEVARRM------VSNGIVEEYK 431

  Fly   493 LPYHDVVPSDPTFEDMHAVVCVKGFRPPIPSRWQEDDVLATVSKIMQECWHPNPTVRLTALRVKK 557
            .|::||||:||:||||..||||...||.||:||..|..|..::|:|:|||:.||:.||||||:||
 Frog   432 PPFYDVVPNDPSFEDMKKVVCVDQQRPNIPNRWFSDPTLTALAKLMKECWYQNPSARLTALRIKK 496

  Fly   558 T-------LGRLETDC 566
            |       |.:|::||
 Frog   497 TLTKIDNSLDKLKSDC 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tkvNP_787990.1 TFP_LU_ECD_Tkv 81..169 CDD:467125 21/88 (24%)
GS 238..266 CDD:197743 17/29 (59%)
STKc_BMPR1 270..562 CDD:271046 163/298 (55%)
acvr1NP_001017357.1 TFP_LU_ECD_ALK2 33..103 CDD:467065 21/86 (24%)
TGF_beta_GS 182..209 CDD:462503 15/26 (58%)
STKc_ACVR1_ALK1 205..502 CDD:271044 167/302 (55%)

Return to query results.
Submit another query.