DRSC/TRiP Functional Genomics Resources

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Protein Alignment tkv and sma-6

DIOPT Version :10

Sequence 1:NP_787990.1 Gene:tkv / 33753 FlyBaseID:FBgn0003716 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_495271.1 Gene:sma-6 / 174044 WormBaseID:WBGene00004860 Length:636 Species:Caenorhabditis elegans


Alignment Length:551 Identity:194/551 - (35%)
Similarity:291/551 - (52%) Gaps:84/551 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 CYCD---GSCPDNVSNGTCETRPGGSCFSAVQQLYDETTGMYEEERTYGCMPPEDNGG--FLMCK 142
            |||:   ..|.:|:   ||..:.|.:|:.||:::|::.....|....:||...|...|  .|.|.
 Worm    68 CYCNYDQSICGNNM---TCVKQDGAACYHAVEEVYNKAEKRMETLHKWGCATLERGSGASHLTCN 129

  Fly   143 VAAVPHLHGKNIVCCDKEDFCNRDLYPT-----YTPKLTTPAPDLPVSSES-LHTLAVFGSIIIS 201
            .....|...|:|.||.:.::||::|.|.     :..|......|.|...:| |..:...|.:.|.
 Worm   130 SWRAAHHSPKSIGCCYEGNYCNKNLIPPAYVHHHKEKALQEKTDNPEDYDSPLENMTRGGKMFIM 194

  Fly   202 -----LSVFMLI-VASLCFT-YKRREKLRKQPRLINSMCNSQLSPLSQLVEQSSGSGSGLPLLVQ 259
                 :|||.:| ...||.| .:.:.|.|.:.:.::....|.......::| .||||||...|:|
 Worm   195 VFATVMSVFAVIGCIYLCITRAEEKSKARARAKTVSLKTESTYMESKSMLE-DSGSGSGQAALIQ 258

  Fly   260 RTIAKQIQMVRLVGKGRYGEVWLAKWRDERVAVKTFFTTEEASWFRETEIYQTVLMRHDNILGFI 324
            ||:.:.:.:::.:|:||||||..|.:|...||||||:||:|.||..|.::|||.::.|:|||.|:
 Worm   259 RTVRQDLTIIKTIGQGRYGEVRKALYRGSYVAVKTFYTTDEDSWKNERDVYQTNMINHENILQFV 323

  Fly   325 AADI-KGNGSWTQMLLITDYHEMGSLHDYL--SMSVINPQKLQLLAFSLASGLAHLHDEIFGTPG 386
            |||| ....|.|:|||||||||:|||.|||  ..::...:.|:|: .|...|:.|||..:.||..
 Worm   324 AADIWSEEDSMTKMLLITDYHELGSLSDYLCREETLTTDEALRLI-HSCICGIEHLHAAVHGTGS 387

  Fly   387 --KPAIAHRDIKSKNILVKRNGQCAIADFGLAVKYNSELDVIHIAQNPRVGTRRYMAPEVLSQQL 449
              ||.|||||||||||:|||...|.|||.|||::|.:: .::....|.:|||:||||||::|.:|
 Worm   388 FRKPEIAHRDIKSKNIIVKRPNVCCIADLGLALRYQND-KILPEKFNVQVGTKRYMAPELISNKL 451

  Fly   450 DPKQFEEFKRADMYSVGLVLWEMTRRCYTPVSGTKTTTCED------------------------ 490
            :||.|.:||.||:||:.||:||:..|       .:..|||:                        
 Worm   452 NPKDFSQFKMADIYSMALVMWEVAIR-------VEVNTCEEVLTVDETSPDHSASSGIGESVSSS 509

  Fly   491 ------------------------YALPYHDVVPSDPTFEDMHAVVCVKGFRPPIPSRWQEDDVL 531
                                    :..|:..:|.:||.|::|:.|:||:..|||....|:....|
 Worm   510 GNISRMHLQKTNVEGHSTSLKAKQHVPPFDGIVHNDPNFDEMNDVICVRRIRPPPDLAWKNVPAL 574

  Fly   532 ATVSKIMQECWHPNPTVRLTALRVKKTLGRL 562
            ..:||:|::.||..|..|.:||::||.:..|
 Worm   575 NELSKLMEDSWHSIPHFRHSALKLKKEMAEL 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tkvNP_787990.1 TFP_LU_ECD_Tkv 81..169 CDD:467125 27/90 (30%)
GS 238..266 CDD:197743 11/27 (41%)
STKc_BMPR1 270..562 CDD:271046 137/344 (40%)
sma-6NP_495271.1 TFP_LU_ECD_sma6 66..153 CDD:467116 26/87 (30%)
GS 238..265 CDD:197743 11/27 (41%)
STKc_TGFbR_I 269..605 CDD:270958 137/344 (40%)

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