DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tkv and Amhr2

DIOPT Version :9

Sequence 1:NP_787990.1 Gene:tkv / 33753 FlyBaseID:FBgn0003716 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001343504.1 Gene:Amhr2 / 110542 MGIID:105062 Length:568 Species:Mus musculus


Alignment Length:548 Identity:151/548 - (27%)
Similarity:236/548 - (43%) Gaps:120/548 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 GMEMGSGPGSEGYEDADNEKSKTVENARSLTCYCDGSCPDNVSNGTCETRPGGSCFSAVQQLYDE 116
            |..:.:|||..             :..|.|..:|                    ||.    :::.
Mouse    40 GEMVDAGPGPP-------------KGIRCLYSHC--------------------CFG----IWNL 67

  Fly   117 TTGMYEEERTYGCMPPEDNG-GFLMCKVAAVPHLH----GKNIVCCDKEDFCNRDLYPTYTPKLT 176
            |.|..:.| ..||...::.| ..|.|.  .||..|    .....|....||||.: |....|...
Mouse    68 THGRAQVE-MQGCRDSDEPGCESLHCD--PVPRAHPNPSSTLFTCSCGTDFCNAN-YSHLPPSGN 128

  Fly   177 TPAPDLPVSSESLHTLAVFGSIIISLSVFMLIVASLCFTYKRREKLRKQPRLINSMCNSQLSPLS 241
            ..||. |...::.....|:.::::.....:|:::|:.....:|:..|.|.       .|...|  
Mouse   129 QGAPG-PQEPQATPGGPVWMALLLLGMFLVLLLSSIILALLQRKACRVQG-------GSDPEP-- 183

  Fly   242 QLVEQSSGSGSG----LPLLVQRTIAKQIQMVRLVGKGRYGEVWLAKWRDERVAVKTFFTTEEAS 302
                   |||..    ||.|.:...::.||      :|.:..||..:.:.|.||:|.|.....|.
Mouse   184 -------GSGGDCSEELPELAELRFSQVIQ------EGGHAVVWAGRLQGEMVAIKAFPPRAVAQ 235

  Fly   303 WFRETEIYQTVLMRHDNILGFIAADIKGNGSW-TQMLLITDYHEMGSLHDYLSMSVINPQKLQLL 366
            :..|..:||.:.::||:|:.||.|...|.|.. :..||:.:.:..|||..||:....:......:
Mouse   236 FRAERAVYQLLGLQHDHIVRFITAGQGGPGPLPSGPLLVLELYPKGSLCHYLTQYTSDWGSSLRM 300

  Fly   367 AFSLASGLAHLHDEIFGTPG--KPAIAHRDIKSKNILVKRNGQCAIADFGLAVKYNSELDVIHIA 429
            |.|||.|||.||:|.: ..|  ||.|||||:.|:|:|::.:..|||.|.|||      |.:..:|
Mouse   301 ALSLAEGLAFLHEERW-QDGQYKPGIAHRDLSSQNVLIREDRSCAIGDLGLA------LVLPGLA 358

  Fly   430 QNP--------------RVGTRRYMAPEVLSQQLDPKQF-EEFKRADMYSVGLVLWEMTRRC--- 476
            |.|              ..||:||||||:|.:.||.:.: ...:|||:||:.|:|||:..||   
Mouse   359 QPPALAPTQPRGPAAILEAGTQRYMAPELLDKTLDLQDWGTALQRADVYSLALLLWEILSRCSDL 423

  Fly   477 ---YTPVSGTKTTTCEDYALPYHDVVPSDPTFEDMHAVVCVKGFRPPIPSRWQEDDVLAT----V 534
               :.|         ..:.|.|...:.|:|:..::.|:...:..||.|||.|   ...||    :
Mouse   424 RPDHRP---------PPFQLAYEAELGSNPSACELWALAVEERKRPNIPSTW---SCSATDPRGL 476

  Fly   535 SKIMQECWHPNPTVRLTALRVKKTLGRL 562
            .:::::||..:|..||||..|::.|..|
Mouse   477 RELLEDCWDADPEARLTAECVQQRLAAL 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tkvNP_787990.1 Activin_recp 81..171 CDD:279413 21/94 (22%)
GS 238..266 CDD:197743 7/31 (23%)
S_TKc 267..557 CDD:214567 104/317 (33%)
STKc_BMPR1 270..562 CDD:271046 104/319 (33%)
Amhr2NP_001343504.1 Activin_recp <61..119 CDD:307282 18/64 (28%)
PKc_like 203..504 CDD:328722 106/325 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834706
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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