DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp28d1 and tbxas1

DIOPT Version :9

Sequence 1:NP_608912.1 Gene:Cyp28d1 / 33749 FlyBaseID:FBgn0031689 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_991172.2 Gene:tbxas1 / 792041 ZFINID:ZDB-GENE-030131-8805 Length:546 Species:Danio rerio


Alignment Length:562 Identity:143/562 - (25%)
Similarity:243/562 - (43%) Gaps:106/562 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ISTALFVIAAILALIYVFLTWNFSYWKKRGIPTAKSWPFVGS---FPSVFTQKRNVVYDIDEIYE 65
            ::..||:::  |:|:|.:....||..::.||...|..||:|:   |.:.|.:.:      .::..
Zfish    20 LTVCLFLLS--LSLLYWYSISPFSNLERCGIKHPKPLPFIGNLMMFRNGFFKSQ------ADLIN 76

  Fly    66 QYKNTDSIVGVFQTRIPQLMVTTPEYAHKIYVSDFRSFHDNEMAK-FTDSKTDPILANNPFVLTG 129
            :|   ..|.|.:..|...:::..|:...::.|.:|..|.:...|: .|...:|.::     :|.|
Zfish    77 KY---GRICGYYIGRRSTVIIADPDMLRQVMVKEFNKFPNRMTARGITKPMSDSLI-----MLKG 133

  Fly   130 EAWKERRAEVTPGLSANRVKAAYPVSLRVCKKFVEYIRRQSLMAPAQGLNAKDL--CL-CYTTEV 191
            |.||..|:.:||..||.::|...|:.....:..:     ::|.:.|:..|:.::  |. |:|.:|
Zfish   134 EQWKRVRSILTPTFSAAKMKEMVPLINTATETLL-----RNLKSHAESENSFNIHKCFGCFTMDV 193

  Fly   192 ISDCVLGISAQSFTDNPTPMVGMTKRVFEQSFG---FIFY-------TVVANLWPPITKFYSVSL 246
            |:....|....|..:...|.|....:.|..||.   .||:       .::|.|.|..::      
Zfish   194 IASVAFGTQVDSQNNPDDPFVHQASKFFAFSFFRPIMIFFMAFPFLLRLLAGLLPNKSR------ 252

  Fly   247 FAKDVAAFFYDLMQKCIQVRRESPAAQQRDDFLNYMLQL-------------------------- 285
              .::.:||...:||.|:.|.:....|:|.|||..||.:                          
Zfish   253 --DEMNSFFTQCIQKMIKQRDDLSPEQRRKDFLQLMLDVRTNKKFLSVEHFDVVNDADEEAYDGH 315

  Fly   286 ------------QEKKGLNAAELTSHTMTFLTDGFETTAQVLTHTLLFLARNPKEQMKLREEIGT 338
                        |:|:.:...|:...:..||..|:||::..|..|...||.:|:.|.||:||:..
Zfish   316 ENSPANESTKRSQQKRMMTEDEIVGQSFIFLVAGYETSSNTLAFTCYLLAVHPECQKKLQEEVDE 380

  Fly   339 -----AELTFEQISELPFTEACIHETLRIFSPVLAARKVVTEPCELTNK---NGVSVKLRPGDVV 395
                 ..:.:..:.||.:.:..|.|:||::.|.....:.|.|...|..:   .|.|::       
Zfish   381 FFSRHETVDYANVQELKYLDMVICESLRLYPPAFRVARDVEEDTVLNGQFLPKGASLE------- 438

  Fly   396 IIPVNALHHDPQYYEEPQSFKPERFLNINGGAKKYRDQGLFFGFGDGPRICPGMRFSLTQIKAAL 460
             ||...||:||:::.||..|.||||   ...||..|...::..||.|||.|.|||.:..:||.||
Zfish   439 -IPTGFLHYDPEHWTEPTKFIPERF---TPEAKARRHPFVYLPFGAGPRSCVGMRLAQLEIKVAL 499

  Fly   461 VEIVRNFDIKVNPKTRKDNEI-DDTYFMPALKGGVWLDFVER 501
            |.|.|.|::.....|....|: ..|...|  |.||.:...||
Zfish   500 VHIFRRFNVLACEDTEIPLELKSHTTLGP--KNGVMVKITER 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28d1NP_608912.1 p450 35..477 CDD:278495 126/504 (25%)
tbxas1NP_991172.2 p450 51..536 CDD:278495 132/524 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.