DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp28d1 and Cyp4a3

DIOPT Version :10

Sequence 1:NP_608912.1 Gene:Cyp28d1 / 33749 FlyBaseID:FBgn0031689 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_038965516.1 Gene:Cyp4a3 / 298423 RGDID:631356 Length:511 Species:Rattus norvegicus


Alignment Length:528 Identity:112/528 - (21%)
Similarity:206/528 - (39%) Gaps:129/528 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ALFVIAAILALIYVFLTWNF----------SYW------KKRGIPTAKSWPFVGSFPSVFTQ--- 52
            :||::.......|:...|..          |:|      |.|......:|  |..||....|   
  Rat    26 SLFLVLFKAVQFYLRRQWLLKALEKFPSTPSHWLWGHDLKDREFQQVLTW--VEKFPGACLQWLS 88

  Fly    53 ---KRNVVYDIDEIYEQYKNTD-SIVGVFQTRIPQLMVTTPEYAHKIYVSDFRSFHDNEMAKFTD 113
               .|.::||.|.:......:| ...|::|...|.::..|                         
  Rat    89 GSKTRVLLYDPDYVKVVLGRSDPKASGIYQFLAPWIVSGT------------------------- 128

  Fly   114 SKTDPILANNPFVLTGEAWKERRAEVTP----GLSANRVK-AAYPVSLRVCK-----------KF 162
                   .....:|.|:.|.:....:||    |:....|| .|..||:.:.|           :.
  Rat   129 -------GYGLLLLNGKKWFQHWRMLTPAFHYGILKPYVKIMADSVSIMLDKWEKLDDQDHPLEI 186

  Fly   163 VEYIRRQSLMAPAQGLNAKDLCLCYTTEVISDCV--------LGISAQSFTDNPTPMVGMTKRVF 219
            ..|:   |||               |.:.:..|.        |.::::|:|.....:..:|  .|
  Rat   187 FHYV---SLM---------------TLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLT--FF 231

  Fly   220 EQSFGFIFYTVVANLWPPITKFYSVSLFAKDVAAFFYD--LMQKCIQVRRESPAAQQRD----DF 278
            .....|...:::.|:    :....:|..|..:|....|  :..:..|::.|....:.|.    ||
  Rat   232 RVRSAFYGNSIIYNM----SSDGRLSRRACQIAHEHTDGVIKMRKAQLQNEEELQKARKKRHLDF 292

  Fly   279 LNYML--QLQEKKGLNAAELTSHTMTFLTDGFETTAQVLTHTLLFLARNPKEQMKLREEI----- 336
            |:.:|  ::::.|.|:..:|.:...||:.:|.:|||..::.....||.:|:.|.:.|||:     
  Rat   293 LDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILG 357

  Fly   337 -GTAELTFEQISELPFTEACIHETLRIFSPVLAARKVVTEPCELTNKNGVSVKLRPGDVVIIPVN 400
             ||: :|::.:.::.:|..||.|.||::.||.:..:.::.|  :|..:|.|:.  .|....|.:.
  Rat   358 DGTS-VTWDHLDQISYTTMCIKEALRLYPPVPSVSRELSSP--VTFPDGRSIP--KGITTTILIY 417

  Fly   401 ALHHDPQYYEEPQSFKPERFLNINGGAKKYRDQGLFFGFGDGPRICPGMRFSLTQIKAALVEIVR 465
            .|||:|.|:..|:.|.|.||     .....|....:..|..|.|.|.|.:|::.::|.|:...:.
  Rat   418 GLHHNPSYWPNPKVFDPSRF-----SPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLL 477

  Fly   466 NFDIKVNP 473
            .|::..:|
  Rat   478 RFELLPDP 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28d1NP_608912.1 CYP6-like 69..495 CDD:410679 95/444 (21%)
Cyp4a3XP_038965516.1 CYP4B-like 69..506 CDD:410771 104/485 (21%)

Return to query results.
Submit another query.