DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28d1 and Tbxas1

DIOPT Version :9

Sequence 1:NP_608912.1 Gene:Cyp28d1 / 33749 FlyBaseID:FBgn0031689 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_036819.1 Gene:Tbxas1 / 24886 RGDID:3826 Length:533 Species:Rattus norvegicus


Alignment Length:556 Identity:133/556 - (23%)
Similarity:238/556 - (42%) Gaps:96/556 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ISTALFVIAAILALIYVFLTWNFSYWKKRGIPTAKSWPFVGS---FPSVFTQKRNVVYDIDEIYE 65
            ::..|.|:  :|||:..:.|..||..:|.||...:..||||:   |...|.:...      |:.|
  Rat    16 VTVTLSVV--LLALLKWYSTSAFSRLRKLGIRHPEPSPFVGNLMFFRQGFWESHL------ELRE 72

  Fly    66 QYKNTDSIVGVFQTRIPQLMVTTPEYAHKIYVSDFRSFHDNEMAKFTDSKTDPILANNPFVLTGE 130
            :|   ..:.|.:..|...::::.|:...::.|.:|.:| .|.||...:.|   ::|::..:|...
  Rat    73 RY---GPLCGYYLGRRMYIVISDPDMIKEVLVENFSNF-SNRMASGLEPK---LIADSVLMLRDR 130

  Fly   131 AWKERRAEVTPGLSANRVKAAYPVSLRVCKKFVEYIRRQSLMAPAQGLNAKDLCLCYTTEVISDC 195
            .|:|.|..:....|..::....|:..:.|:..:.:::..:  |.....:.:....|:||.|::..
  Rat   131 RWEEVRGALMSAFSPEKLNEMTPLISQACELLLSHLKHSA--ASGDAFDIQRCYCCFTTNVVASV 193

  Fly   196 VLGISAQSFTDNPTPMVGMTKRVFEQSFGFIFYTVVANLWPPITKFYSVSL-FAK--------DV 251
            ..||...|......|.|...:|||.       ::....|...|..|.|:.: .|:        ::
  Rat   194 AFGIEVNSQDAPEDPFVQHCQRVFA-------FSTPRPLLALILSFPSIMVPLARILPNKNRDEL 251

  Fly   252 AAFFYDLMQKCIQVRRESPAAQQRDDFLNYMLQLQEK---------------------------- 288
            ..||..|::..|.:|.:..|.::|.|||..:|..|..                            
  Rat   252 NGFFNTLIRNVIALRDKQTAEERRGDFLQMVLDAQRSMSSVGVEAFDMVTEALSSAECMGDPPQR 316

  Fly   289 -------KGLNAAELTSHTMTFLTDGFETTAQVLTHTLLFLARNPKEQMKLREEIGTAELTFEQ- 345
                   |.|...|:......||..|.|.|...|:.....||.:|:.|.:|.:|:   :|..|: 
  Rat   317 CHPTSTAKPLTVDEIAGQAFLFLIAGHEITTNTLSFITYLLATHPECQERLLKEV---DLFMEKH 378

  Fly   346 -------ISE-LPFTEACIHETLRIFSPVLAARKVVTEPCELTNKNGVSVKLRPGDVVIIPVNAL 402
                   :.| ||:.:..:.||||::.|.....:...:.||:..::     :..|.|:.|.|.||
  Rat   379 PAPEYCNLQEGLPYLDMVVAETLRMYPPAFRFTREAAQDCEVLGQH-----IPAGSVLEIAVGAL 438

  Fly   403 HHDPQYYEEPQSFKPERFLNINGGAKKYRDQGLFFGFGDGPRICPGMRFSLTQIKAALVEIVRNF 467
            ||||:::..|::|.||||   ...|:..:....:..||.|||.|.|:|..|..:|..|::::..|
  Rat   439 HHDPEHWPNPETFDPERF---TAEARLQQKPFTYLPFGAGPRSCLGVRLGLLVVKLTLLQVLHKF 500

  Fly   468 DIKVNPKTRKDNEIDDTYFMPAL--KGGVWLDFVER 501
            ..:..|:|:...:::.   ..||  |.||::..|.|
  Rat   501 RFEACPETQVPLQLES---KSALCPKNGVYVKIVSR 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28d1NP_608912.1 p450 35..477 CDD:278495 115/497 (23%)
Tbxas1NP_036819.1 p450 47..530 CDD:278495 120/518 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.780

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