DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp28d1 and cyp-13A8

DIOPT Version :9

Sequence 1:NP_608912.1 Gene:Cyp28d1 / 33749 FlyBaseID:FBgn0031689 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_496115.1 Gene:cyp-13A8 / 188358 WormBaseID:WBGene00011674 Length:509 Species:Caenorhabditis elegans


Alignment Length:523 Identity:133/523 - (25%)
Similarity:216/523 - (41%) Gaps:95/523 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VIAAILALIYVFLTWNFSYWKKRGIPTAKSWPFVG--------SFPSVFTQKRNVVYDIDEIYEQ 66
            :...||..|..:..|::::||:||:|.....|..|        |||..:|           :.:.
 Worm     2 IFELILISIVTYYFWHWTFWKRRGLPGPWGVPIFGKAGAMLEDSFPPGYT-----------LQKW 55

  Fly    67 YKNTDSIVGVFQTRIPQLMVTTPEYAHKIYVSDFRSFHDNEMAKFTDSKTDPILANNPFVL--TG 129
            .|....|.|..:.....::::.|:...:|.|..:.:|:..   |....:.||....:..::  .|
 Worm    56 TKEYGKIYGFTEGMQKVMVISDPDLVQEILVKQYDNFYGR---KHNPVQGDPDKDKDIHIVGAQG 117

  Fly   130 EAWKERRAEVTPGLSANRVKAAYPVSLRVCKKFVEYIRRQSLMAPAQGLNAKDLCLCYTTEVISD 194
            ..||..|....|..|...:|..........::.::.:|.:|  ...:.:|.......||.:|||.
 Worm   118 FRWKRLRTITAPAFSNGSIKKVLTTMEDSTQELMKKLREES--ENGKAVNMHLFYQEYTFDVISR 180

  Fly   195 CVLG-ISAQSFTDNPTPMVGMTKRVFEQ--------SFGFIFYTVVANL-WPPITKFYSVSLFAK 249
            ..:| ..:|.|.:   |::...|..||.        |.||.|  .|:.| |    .|..|..|  
 Worm   181 VAMGQPDSQMFKN---PLLKDVKGFFEHNRWQIWMFSGGFPF--AVSFLKW----LFIKVGKF-- 234

  Fly   250 DVAAFFYDLMQKCIQ-------VRRES---------PAAQQRDDFLNYMLQLQ------------ 286
              .|..:.::||.:.       .:||:         .||...|.|||...:::            
 Worm   235 --GAGPFIVVQKSVTDAVMSRIAQREADKKHGVEPGEAADYIDMFLNARAEVEHFGESNDEFHKS 297

  Fly   287 ---EKKGLNAAELTSHTMTFLTDGFETTAQVLTHTLLFLARNPKEQMKLREEIG----TAELTFE 344
               ..:.|...|:.|....||..||:|||..|::...|||.|||.|.||::|:.    ..|:||:
 Worm   298 SSYNNRQLTTQEIISQCFVFLVAGFDTTAISLSYVTYFLALNPKIQSKLQDEVDKECPNDEITFD 362

  Fly   345 QISELPFTEACIHETLRIFSPVLAARKVVTEPCELTNKNGVSVKLRPGDVVIIPVNALHHDPQYY 409
            |:|:|.:.:..|.|:||:|.....|.   :..|......|..: :..|..|:|....||||...:
 Worm   363 QLSKLKYMDNVIKESLRLFPFASFAN---SRRCMRNTVIGEQI-VEAGVDVMIDTWTLHHDKNVW 423

  Fly   410 -EEPQSFKPERFLNINGGAKKYRDQGLFFGFGDGPRICPGMRFSLTQIKAALVEIVRNFDIKVNP 473
             .:.:.|||||:      ......|..:..||.|||:|.||||:|.:.|..|..|::.:..:.|.
 Worm   424 GNDVEEFKPERW------DSPLTPQQAYLSFGAGPRVCLGMRFALLEQKGLLSHILKKYTFETNA 482

  Fly   474 KTR 476
            ||:
 Worm   483 KTQ 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28d1NP_608912.1 p450 35..477 CDD:278495 125/498 (25%)
cyp-13A8NP_496115.1 p450 27..503 CDD:278495 125/498 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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