DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28d1 and cyp-34A8

DIOPT Version :9

Sequence 1:NP_608912.1 Gene:Cyp28d1 / 33749 FlyBaseID:FBgn0031689 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_504102.2 Gene:cyp-34A8 / 181850 WormBaseID:WBGene00015043 Length:499 Species:Caenorhabditis elegans


Alignment Length:545 Identity:119/545 - (21%)
Similarity:228/545 - (41%) Gaps:100/545 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VIAAILALIYVFLTWNFSYWKKR-GIPTAKS-WPFVGSFPSVF---TQKRNVVYDIDEIYEQYKN 69
            ::..||..:...||.|.  |:.| .:|...: .|.:|:|..:|   .:..::|...:|:.:||  
 Worm     2 LLILILLAVAAVLTANL--WRARQKLPKGPTPLPLIGNFHQLFYLSWKTGSLVAAFNELKKQY-- 62

  Fly    70 TDSIVGVFQTRIPQLMVTTPEYAHKIYVSDFRSFHD----NEMAKFTDSKTDPILANNPFVLTGE 130
             ..:..|:....|.:.:...:.||:.:|.....|..    ..|....:.:  .|:.:|     |:
 Worm    63 -GKVFTVWMGPKPSVYICDYDIAHETHVKRANIFGTRYSVGGMEYIREGR--GIIGSN-----GD 119

  Fly   131 AWKERRA---------EVTPGLSANRVKAAYPVSLRVCKKFVEYIRRQSLMAPAQGLNAKDLCLC 186
            .|.|.|.         .|...:..:::...|..      :|.:: :|......|..:||..:...
 Worm   120 FWLEHRRFALMTLRNFGVGRTIMEDKIMDEYRY------RFKDF-KRTHFKNGAIQVNASSIFDL 177

  Fly   187 YTTEVISDCVLG----ISAQSFTDNPTPMVGMTKR--VFEQSFGFIFYTVVANLW---PPITKFY 242
            ....:|:..::.    ...|.|....|.:....:.  :.|   ||:      .||   .|:.|:.
 Worm   178 LVGSIINQLLVSERFEQDDQEFEKLKTSLAEALENISIIE---GFL------PLWVLKSPLMKWR 233

  Fly   243 SVSLFAKDVAAFFYDLMQKCIQVRRES------PAAQQRDDFLN-YMLQLQ--EKKGLNAAELTS 298
            :...||.  ..|.::|..:.||.|..:      ..:::.|||:: ::::::  :|:|:::: .|.
 Worm   234 TKITFAP--FDFIFELGNRGIQRRVAAIENGTHTLSEEGDDFVDAFIVKMEKDKKEGIDSS-FTL 295

  Fly   299 HTMTF-LTD----GFETTAQVLTHTLLFLARNPKEQMKLREEI-----GTAELTFEQISELPFTE 353
            .|:.. |.|    |.|||:..||...:.|..:|:...|||:|:     ||..::....::.|:..
 Worm   296 ETLAIDLFDLWQAGQETTSTTLTWACVCLLNHPEVVEKLRKELTEVTGGTRGVSLTDRTKTPYLN 360

  Fly   354 ACIHETLRIFSPVLAAR--KVVTEPCELTNKNGVSVKLRPGDVVIIPVNALHHDPQYYEEPQSFK 416
            |.|:|..||.| :|...  :|:.|...:.     |..:..|.:|...::.||.|.:.::.||.|:
 Worm   361 ANINEFQRIAS-ILNVNLFRVLEEDTTID-----SQPVPAGALVTTNLSMLHTDEEIFKNPQEFR 419

  Fly   417 PERFLNINGGAKKYRDQGLFFGFGDGPRICPGMRFSLTQIKAALVEIVRNFDIK---VNPKTRKD 478
            ||||:..|...|:      ...||.|.|.|||...:..::......::.::|::   ..||..  
 Worm   420 PERFMENNNLEKR------LIPFGIGKRACPGESLARAELFLITGNMILDYDLEPVGTLPKIE-- 476

  Fly   479 NEIDDTYFMPALKGGVW-LDFVERN 502
               ..|.|.|..:..|: :.||.|:
 Worm   477 ---TTTPFAPMKRPPVYDIRFVPRS 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28d1NP_608912.1 p450 35..477 CDD:278495 105/491 (21%)
cyp-34A8NP_504102.2 p450 26..494 CDD:278495 109/513 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5580
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.860

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