DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp28d1 and cyp-34A5

DIOPT Version :9

Sequence 1:NP_608912.1 Gene:Cyp28d1 / 33749 FlyBaseID:FBgn0031689 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_504099.1 Gene:cyp-34A5 / 181847 WormBaseID:WBGene00015040 Length:499 Species:Caenorhabditis elegans


Alignment Length:538 Identity:115/538 - (21%)
Similarity:209/538 - (38%) Gaps:131/538 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFVIAAILALIYVFLTWNFSYWKKRGIPTAKSWPFVGSFPSVFTQKRNVVYDIDEIYEQYKNTDS 72
            :|:| .||..|..:.:.|....::|........|.:|:...:             ||..:| |..
 Worm     1 MFLI-LILTSILTYFSINLWRGRRRNPKGPLPLPLIGNLHQL-------------IYNSWK-TGG 50

  Fly    73 IVGVFQT--------------RIPQLMVTTPEYAHKIYVSDFRSF-HDNEMAKFTDSKTDPILAN 122
            :|..||.              .||.:.:...:.|::.:|.....| |     :||....|.|...
 Worm    51 MVAGFQEFKKHYGKFFTLWFGPIPIVFIADYDIAYETHVKRANVFGH-----RFTIGGMDYIREG 110

  Fly   123 NPFV-LTGEAWKE-RRAEVTP----GLSAN----RVKAAYPVSLRVCKK---------------- 161
            ...| ..|:.|:| ||..:|.    |:..|    ::...|...::...|                
 Worm   111 RGIVGSNGDFWQEHRRFALTTLRNFGVGRNIMEDKIMDEYRYRIQDFSKTHGKNGVIEVNATTMF 175

  Fly   162 --FVEYIRRQSLMAP--AQGLNAKDLCLCYTTEVISDCVLGISAQSFTDNPTPMVGMTKRVFEQS 222
              .|..|..:.|::.  .||....:....|.|:.:.:.       |..|:.||:..:..|:..  
 Worm   176 DLLVGSIINRMLVSERFEQGDQDFEKLKMYLTKALEEL-------SIFDSFTPLWLLKSRILR-- 231

  Fly   223 FGFIFYTVVANLWPPITKFYSVSLFAKDVAAFFYDLMQKCIQVRRES------PAAQQRDDFLN- 280
                        |.  ||   |::...|   |.|:|::..||.|...      ..:::.|||:: 
 Worm   232 ------------WR--TK---VTMAPFD---FVYELVKNGIQKRTSEIKNGSHVISEEGDDFVDA 276

  Fly   281 YMLQLQ--EKKGLNAAELTSHTMTF-LTD----GFETTAQVLTHTLLFLARNPKEQMKLREEI-- 336
            ::::::  :|:|:::. .|..|:.. |.|    |.|||:..||.....|..:|:...|||:|:  
 Worm   277 FLIKIEKDKKEGIDST-FTLETLAIDLFDLWLAGQETTSTTLTWAGTCLLNHPEVVEKLRKELIQ 340

  Fly   337 ---GTAELTFEQISELPFTEACIHETLRIFSPVLAAR--KVVTEPCELTNKNGVSVKLRPGDVVI 396
               ||..::....::.|:..|.::|..|| |.:|...  :.:.|...:..:     .:..|.||.
 Worm   341 ITGGTRSVSLTDRAQTPYLTAVVNEVQRI-SSILNVNIFRQLQEDSHIDGQ-----PIASGSVVT 399

  Fly   397 IPVNALHHDPQYYEEPQSFKPERFLNINGGAKKYRDQGLFFGFGDGPRICPGMRFSLTQIKAALV 461
            ..:..:|.|...:::...|.||||:..|...||      ...||.|.|.|||...:..::...:.
 Worm   400 TQLAMIHTDEDLFKDHTKFDPERFIENNNLDKK------LIPFGIGKRSCPGESLARAELYLIIG 458

  Fly   462 EIVRNFDIK---VNPKTR 476
            .:|.:|:::   |.|:.:
 Worm   459 NLVLDFNLEAVGVKPEIK 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28d1NP_608912.1 p450 35..477 CDD:278495 108/511 (21%)
cyp-34A5NP_504099.1 p450 26..490 CDD:278495 108/512 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5580
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.860

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