DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28d1 and cyp-13B1

DIOPT Version :9

Sequence 1:NP_608912.1 Gene:Cyp28d1 / 33749 FlyBaseID:FBgn0031689 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_510233.1 Gene:cyp-13B1 / 181462 WormBaseID:WBGene00008519 Length:510 Species:Caenorhabditis elegans


Alignment Length:532 Identity:126/532 - (23%)
Similarity:232/532 - (43%) Gaps:100/532 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ALFVIAAILALIYVFLTWNFSYWKKRGIPTAKSWPFVGSFPSVFTQKRNVVYDIDEI-----YEQ 66
            |:.|:..:.|.|..:..|..:||::|||...:..||:|::           ||:.::     |..
 Worm     3 AIIVLVVLFATIAGYFKWIHTYWRRRGISGPEGLPFIGNY-----------YDLADVNKPRGYLI 56

  Fly    67 YKNTD---SIVGVFQTRIPQLMVTTPEYAHKIYVSDFRSFHDNEMAKFTD-----SKTDPILANN 123
            :|.|.   .:.|.::..:|.|:|:..:...::::..|.:|:..:......     ||::|.:  |
 Worm    57 HKWTQKFGKVFGYYEGAVPVLVVSDMDMLQELFLKKFDNFYARKSTNHIHGNLECSKSEPRI--N 119

  Fly   124 PFVLTGEAWKERRAEVTPGLSANRVKAAYPVSLRVCKKFVEYIRRQSLMAPAQGLNAKDLCLCYT 188
            .|...|..||..||..:||.|...:|..:.|........|:.:.:.....|   .|.......:|
 Worm   120 LFTSRGARWKRLRALASPGFSVKALKQVHDVMEDSAINMVDLMAKHEDGKP---FNIHAYFQEFT 181

  Fly   189 TEVISDCVLGISAQSFTDNPTPMVGMTKRVFEQSFGFI--FYTVVANLWPPITK--FYS-VSLFA 248
            .:|||...:|.......:|..  |.:.|.:|.::...:  ::||:...:..:.|  ||: .::..
 Worm   182 YDVISRLAMGQPNSELFNNSG--VEIVKSIFMRTHRVLPWYFTVLFPQFEHLVKRMFYNHAAVQG 244

  Fly   249 KDVAAFFYDLMQKCIQVRRESPAAQQRDD----------------FLNYMLQLQE--------KK 289
            .|:..... :.:|.::.|     .|:|::                ||||..:..|        :|
 Worm   245 GDIEKLLL-ICKKTVESR-----IQEREENAKLGFENAENDFIDMFLNYYSEQVEDIEFGSTVEK 303

  Fly   290 GLNAAELTSHTMTFLTDGFETTAQVLTHTLLFLARNPKEQMKLREE-----IGTAELTFEQISEL 349
            .:.|.::......||..||:|||..|.:....||::| |:|||.:|     :|:..::::.:::|
 Worm   304 KVTAEDVIGACFVFLLAGFDTTANSLAYASYLLAKHP-EKMKLAQEEVDTVVGSENVSYDDMTKL 367

  Fly   350 PFTEACIHETLRIFSPV--LAARKVVTEPCELTNKNGVSVKLRPGDVVI-------IPVNALHHD 405
            .:.:|.:.|:||:: ||  .|..:...:|..|            ||:.|       ..|.:||..
 Worm   368 KYLDAVVRESLRLY-PVAWFACSRECVKPTTL------------GDIYIDKGVKIEADVMSLHRS 419

  Fly   406 PQYY-EEPQSFKPERFLNINGGAKKYRDQGLFFGFGDGPRICPGMRFSLTQIKAALVEIVRNFDI 469
            .:.: |....|.|||:|..:.     |....:..||.|||.|.|||..|::.|.||..::|.:|:
 Worm   420 KEIWGENADDFVPERWLEPSS-----RHTMSWIPFGAGPRQCVGMRLGLSEAKTALAHLLRRYDL 479

  Fly   470 KVNPKTRKDNEI 481
            ....:|.|:..|
 Worm   480 VAGVETEKELNI 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28d1NP_608912.1 p450 35..477 CDD:278495 114/498 (23%)
cyp-13B1NP_510233.1 p450 31..479 CDD:306555 112/490 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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