DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28d2 and cyp3c4

DIOPT Version :10

Sequence 1:NP_608911.1 Gene:Cyp28d2 / 33748 FlyBaseID:FBgn0031688 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001071016.1 Gene:cyp3c4 / 558541 ZFINID:ZDB-GENE-060929-96 Length:507 Species:Danio rerio


Alignment Length:517 Identity:146/517 - (28%)
Similarity:245/517 - (47%) Gaps:77/517 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TFLVLVLTLLVLVYVFLTWNFNYWRKRGIKTAPTWPFVGSFPSIFTRKRNIAYDIDDIYEKYKDT 70
            |.:|||:|||   :::..|...::.|.||.....|||||:..|.  .|....:|: :..:||   
Zfish    12 TLVVLVITLL---FIYGVWPHRFFIKLGIPGPRPWPFVGTLLSY--AKGLCNFDM-ECAKKY--- 67

  Fly    71 DNMVGVFTTRVPQLLVMCPEYIHKIYATDFRSFHNNEWRNFVN--KKTDMILGNNPF----VLTG 129
            ..:.|::..|:|.|:|...|.|..:...:..|       ||:|  |:|..:.|  ||    ::..
Zfish    68 GKVWGIYDGRLPILMVADLEVIKVVLVKECYS-------NFINRRKRTTGLAG--PFSDGIIMVK 123

  Fly   130 DE-WKERRSEIMPALSPNRVKAVYPVSQSVCKKFVEYIRRQQQMATSEGLDAMDLSLCYTTEVVS 193
            || ||..||.:.|..:..|:|.::|::.:...:|   |:..|:....:.:...::...|:.:|::
Zfish   124 DERWKRMRSTLSPYFTSGRLKEIFPIAMTHADRF---IKNMQKKDPEQPVKIKEVVAPYSLDVIT 185

  Fly   194 DCGLGVSAQSFTDTPTPLLKMIKR-----VFNTSFEFI--FYSVVTNLWQKVRKFYSVPFFNKET 251
            .....|...|..:...|.:..:|:     :||.....|  |.|:...|     |...|..|:|..
Zfish   186 SSSFSVDIDSINNPEDPFVINVKKFIQFNMFNPLLLLILLFPSLAIPL-----KKMGVTLFSKSA 245

  Fly   252 EVFFLDIIRRCITLRLEKPEQQRDDFLNYMLQ--------------LQEKKGLHTDNILINTMTF 302
            ..||..:::: |.....|..:.|.|||..|||              .|..|||....||..::.|
Zfish   246 MDFFYSVLKK-IKDDHNKESEGRVDFLKLMLQNQIPDDQIQDSDTSEQPAKGLTDHEILSQSLVF 309

  Fly   303 ILDGFETTALVLAHIMLMLGRNPEEQDKVRKEIG-----SADLTFDQMSELPHLDACIYETLRLF 362
            ||.|:|||:..|..::..|..||:..:|:.:||.     ...:|:|.:..:.:|:..|.|::||.
Zfish   310 ILGGYETTSTTLTFLLYNLATNPDCLEKLVEEIDKNFPLDTPITYDALMRMDYLEMAINESMRLL 374

  Fly   363 --SPQV--AARKLVTEPFEFANKNGRTVHLKPGDVVTIPVKALHHDPQYYEDPLTFKPERFLESN 423
              :|::  :|:|.|.       .||.|:  ..|.:|.||...|.|||..:|.|..|:||||...|
Zfish   375 PTAPRLERSAKKTVV-------INGLTI--PEGTLVGIPTYVLSHDPDIWESPGEFRPERFSPEN 430

  Fly   424 GGGMKSYRDRGVYLAFGDGPRHCPGMRFALTQLKAALVEILRNFEIKVNPKTRSDNQIDDTF 485
            ......|    .::.||.|||:|.|||:|:..:|..:|::|:||.::...:|:...:::.||
Zfish   431 KSEFLQY----AFIPFGLGPRNCIGMRYAVMIMKLFVVKLLQNFSVETCKETQIPLEMNVTF 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28d2NP_608911.1 CYP6-like 74..495 CDD:410679 125/449 (28%)
cyp3c4NP_001071016.1 cytochrome_P450 66..497 CDD:477761 127/457 (28%)

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