DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28d2 and Cyp4d20

DIOPT Version :10

Sequence 1:NP_608911.1 Gene:Cyp28d2 / 33748 FlyBaseID:FBgn0031688 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster


Alignment Length:540 Identity:122/540 - (22%)
Similarity:220/540 - (40%) Gaps:140/540 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FLVLVLTLLVLVYVFLTWNFNYWRKRGI---KTAPTWPFVGSFP-------SIFTRKRNIAYDID 61
            :|.|:...|:|:   |||:|...|:|.:   |:|...|.  |.|       ::.....||...:.
  Fly     2 WLTLITGALILL---LTWDFGRKRQRVLAFEKSAIPGPI--SIPILGCGLQALHLGAENIIGWVG 61

  Fly    62 DIYEKYKDTDN--MVGVFTTRVPQLLVMCPEYIHKIYATDFRSFHNNEWRNFVNKKTDMILGNNP 124
            :.::||..|..  ::|              |.:  ||..|.:.|........:.:|..:.....|
  Fly    62 EKFDKYGKTFRFWILG--------------ESL--IYTKDLQYFETILSSTTLLEKGQLYEYLRP 110

  Fly   125 F------VLTGDEWKERRSEIMPALSPNRVKAVYPVSQSVCKKFVEYIRRQQQM------ATSEG 177
            |      |.||.:|..||.....|.           ...|.:.:||.:.|...:      ..::|
  Fly   111 FLNDGLLVSTGRKWHARRKIFTHAF-----------HFKVLEHYVEIMDRHSSVMVDNLRKVADG 164

  Fly   178 LDAMDLSLCYTT----EVVSDCGLGVSAQSFTDTPTPLLKMIKRV----------FNTSFEFIFY 228
            ..|:|: |.|.:    :|:::..:||...:..|...|.:|.:|.|          |:..:.::|.
  Fly   165 KTAVDM-LKYVSLAALDVITEAAMGVQVNAQNDPDFPYIKALKSVVYIQPDRMFRFSRRYNWLFP 228

  Fly   229 SVVTNLWQKVRKFYSVPFFNKE--TEVFFL-DIIRRCITLRLEKPEQQRDD-------------- 276
                         .:.|..:::  :::..: |...:.|:.|.|...:.:.|              
  Fly   229 -------------LAAPLLHRQLLSDIRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIG 280

  Fly   277 ------FLNYMLQLQ-EKKGLHTDNILINTMTFILDGFETTALVLAHIMLMLGRNPEEQDKVRKE 334
                  .|:.:||.. ..:.|...:|.....||:.:|.:||:..::|.:..:.|:||.|.::.:|
  Fly   281 SKSQMALLDILLQSSINNQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEE 345

  Fly   335 I-------GSADLTFDQMSELPHLDACIYETLRLFSPQVAARKLVTEPFEFANKNGRTVHLKPGD 392
            :       .||.:|..|:.:|.:||..|.||:||:.|..|..:...:..|..:|           
  Fly   346 LQRVLGPDASAPVTQAQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDK----------- 399

  Fly   393 VVTIPVKA--------LHHDPQYYEDPLTFKPERFLESNGGGMKSYRDRGVYLAFGDGPRHCPGM 449
              |||...        .|.|..|:.|||:|:||||||....|..::    .|:.|..||::|.|.
  Fly   400 --TIPANTSIYLVLYYAHRDANYFPDPLSFRPERFLEDQEQGHNTF----AYVPFSAGPKNCIGQ 458

  Fly   450 RFALTQLKAALVEILRNFEI 469
            :||:.::|..:.::||.:|:
  Fly   459 KFAVLEMKVLISKVLRFYEL 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28d2NP_608911.1 CYP6-like 74..495 CDD:410679 102/461 (22%)
Cyp4d20NP_647723.2 CYP4 68..501 CDD:410721 103/469 (22%)

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