DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp28d2 and cyp-13A3

DIOPT Version :9

Sequence 1:NP_608911.1 Gene:Cyp28d2 / 33748 FlyBaseID:FBgn0031688 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_496110.1 Gene:cyp-13A3 / 188359 WormBaseID:WBGene00011675 Length:520 Species:Caenorhabditis elegans


Alignment Length:531 Identity:137/531 - (25%)
Similarity:237/531 - (44%) Gaps:105/531 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LVLVLTLLVLVYVFLTWNFNYWRKRGIKTAPTWPFVG---SFPSIFTRKRNIAYDIDDIYEK--- 66
            :::.:.|.:.|:.:..|.:::|.::|||.....||.|   :|.|               |||   
 Worm     5 ILIAIALFIGVFTYYLWIWSFWMRKGIKGPRGLPFFGIINAFQS---------------YEKPWI 54

  Fly    67 ------YKDTDNMVGVFTTRVPQLLVMC-PEYIHKIYATDFRSFHNNEWRNFVNKKTDMILGN-- 122
                  .|:...|.| ||..|.:.||:. ||::|:::...|        .||..:|.:.:.|:  
 Worm    55 LRLGDWTKEYGPMYG-FTDGVEKTLVVSDPEFVHEVFVKQF--------DNFYARKQNPLQGDPD 110

  Fly   123 -NPFV----LTGDEWKERRSEIMPALSPNRVKAVYPVSQSVCKKFVEYIRRQQQMATSEG--LDA 180
             :|.:    ..|..||..|:...|..|...::.::    |..::.|..:.|..:..|:.|  :|.
 Worm   111 KDPRIHLVTSQGHRWKRLRTLASPTFSNKSLRKIF----STVEESVAEMMRHLEKGTAGGKTIDI 171

  Fly   181 MDLSLCYTTEVVSDCGLGVSAQSFTDTPTPLLKMIKRVFNT--SFEFIFYSVVTNLWQKVRKFYS 243
            ::....:|.:::....:|.|.....:  .|.|..|:.:|||  :..||...:|.......|.|:|
 Worm   172 LEYYQEFTMDIIGKIAMGQSGSMMFE--NPWLDKIRAIFNTRGNIIFIICGIVPFTGSIFRWFFS 234

  Fly   244 -VPFFNKETEVFFLDIIRRCITLRLE----------KPEQQRDDFLNYMLQLQE----------- 286
             ||  ..:|....:..:...:|.|:|          :...:..||::..|.:|.           
 Worm   235 KVP--TAQTVTSLMHTLEIALTKRVEQRAADEKAGIESSGEPQDFIDLFLDVQADTDFLEDETKN 297

  Fly   287 ----------KKGLHTDNILINTMTFILDGFETTALVLAHIMLMLGRNPEEQDKVRKEIG----S 337
                      .|.|..|.|:.....|:|.|::||||.|::...:|.|:||.|.|:::|:.    .
 Worm   298 GFARSQIVKVDKHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKKLQEEVDRECPD 362

  Fly   338 ADLTFDQMSELPHLDACIYETLRLF--SPQVAARKLVTEPFEFANKNGRTVHLKPGDVVTIPVKA 400
            .::||||:|:|.:::..|.|||||:  :..|..||.:........|      ::.|..|......
 Worm   363 PEVTFDQLSKLKYMECVIKETLRLYPLASIVHNRKCMKSTTVLGMK------IEEGTNVQADTWT 421

  Fly   401 LHHDPQYY-EDPLTFKPERFLESNGGGMKSYRDRGVYLAFGDGPRHCPGMRFALTQLKAALVEIL 464
            ||:||::: |:...|||||: ||   |.:....:|.||.||.|||.|.|||.|..:.|..|.:||
 Worm   422 LHYDPKFWGENANEFKPERW-ES---GDEQAVAKGAYLPFGLGPRICIGMRLAYMEEKMLLAQIL 482

  Fly   465 RNFEIKVNPKT 475
            :.:.::...:|
 Worm   483 KKYSLETTFET 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28d2NP_608911.1 p450 38..475 CDD:299894 129/499 (26%)
cyp-13A3NP_496110.1 p450 33..512 CDD:278495 130/503 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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