DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp28d2 and cyp-13A5

DIOPT Version :9

Sequence 1:NP_608911.1 Gene:Cyp28d2 / 33748 FlyBaseID:FBgn0031688 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_496112.1 Gene:cyp-13A5 / 188356 WormBaseID:WBGene00011672 Length:520 Species:Caenorhabditis elegans


Alignment Length:524 Identity:126/524 - (24%)
Similarity:232/524 - (44%) Gaps:109/524 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VLVYVFLTWNFNYWRKRGIKTAPTWPFVGSFPSIFTRKRNIAYDIDDIYEK---------YKDTD 71
            :|.|....|:|  |.::|:|....:||.|           :.::..| ||.         .|:..
 Worm    15 LLTYYIWIWSF--WIRKGVKGPRGFPFFG-----------VIHEFQD-YENPGLLKLGEWTKEYG 65

  Fly    72 NMVGVFTTRVPQLLVMCPEYIHKIYATDFRSFHNNEWRNFVNKKTDMILGN-------NPFVLTG 129
            .:.|:.......|:|..||::|:::...|        .||..:||:.|.|:       :.....|
 Worm    66 PIYGITEGVEKTLIVSNPEFVHEVFVKQF--------DNFYGRKTNPIQGDPNKNKRAHLVSAQG 122

  Fly   130 DEWKERRSEIMPALSPNRVKAVYPVSQSVCKKFVEYIRRQQQMATSEG--LDAMDLSLCYTTEVV 192
            ..||..|:...|..|...::.:    .|..::.|..:.|....|:::|  :|.:|....:|.:::
 Worm   123 HRWKRLRTLSSPTFSNKNLRKI----MSTVEETVVELMRHLDDASAKGKAVDLLDYYQEFTLDII 183

  Fly   193 SDCGLG-VSAQSFTDTPTPLLKMIKRVFNTSFEFIF-----YSVVTNLWQK-VRKFYSV-PFFNK 249
            ....:| ..:..|.:   |:|..:|.:|....:..|     :.:...:::: ..:|.|: |.|: 
 Worm   184 GRIAMGQTESLMFRN---PMLPKVKGIFKDGRKLPFLVSGIFPIAGTMFREFFMRFPSIQPAFD- 244

  Fly   250 ETEVFFLDIIRRCITLRLE----------KPEQQRDDFLNYMLQLQEK----------------- 287
                 .:..:.:.:..|||          :|..:..||::..|..:..                 
 Worm   245 -----IMSTVEKALNKRLEQRAADEKAGIEPSGEPQDFIDLFLDARANVDFFEEESALGFAKTEI 304

  Fly   288 ----KGLHTDNILINTMTFILDGFETTALVLAHIMLMLGRNPEEQDKVRKEIG----SADLTFDQ 344
                |.|..|.|:.....|:|.|::||||.|::...:|.|:||.|.|:::|:.    :.::||||
 Worm   305 AKVDKQLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKKLQEEVDRECPNPEVTFDQ 369

  Fly   345 MSELPHLDACIYETLRLF--SPQVAARKLVTEPFEFANKNGRTVHLKPGDVVTIPVKALHHDPQY 407
            :|:|.:::..:.|.||::  :..|..||.:.|      .|...|.::.|..|.:....||:||:.
 Worm   370 ISKLKYMECVVKEALRMYPLASIVHNRKCMKE------TNVLGVQIEKGTNVQVDTWTLHYDPKV 428

  Fly   408 Y-EDPLTFKPERFLESNGGGMKSYRDRGVYLAFGDGPRHCPGMRFALTQLKAALVEILRNFEIKV 471
            : ||...|:|||: ||   |.:.:..:|.||.||.|||.|.|||.|:.:.|..|..||:.:..:.
 Worm   429 WGEDANEFRPERW-ES---GDELFYAKGGYLPFGMGPRICIGMRLAMMEKKMLLTHILKKYTFET 489

  Fly   472 NPKT 475
            :.:|
 Worm   490 STQT 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28d2NP_608911.1 p450 38..475 CDD:299894 118/500 (24%)
cyp-13A5NP_496112.1 p450 33..514 CDD:278495 119/504 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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