DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp28d2 and cyp-13A4

DIOPT Version :9

Sequence 1:NP_608911.1 Gene:Cyp28d2 / 33748 FlyBaseID:FBgn0031688 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_496111.1 Gene:cyp-13A4 / 188355 WormBaseID:WBGene00011671 Length:520 Species:Caenorhabditis elegans


Alignment Length:539 Identity:133/539 - (24%)
Similarity:235/539 - (43%) Gaps:123/539 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LTLLV---LVYVFLT---WNFNYWRKRGIKTAPTWPFVGSF--------PSI-----FTRKRNIA 57
            |:||:   |...|||   |.:::|.::|:|....:||.|..        |.:     :|:|....
 Worm     3 LSLLIAGALFIGFLTYYIWIWSFWIRKGVKGPRGFPFFGVILKFHDYENPGLLKLGEWTKKYGSI 67

  Fly    58 YDIDDIYEKYKDTDNMVGVFTTRVPQLLVMCPEYIHKIYATDFRSFHNNEWRNFVNKKTDMILGN 122
            |.|.:..||                .|:|..||::|:::...|        .||..:||:.|.|:
 Worm    68 YGITEGVEK----------------TLVVSNPEFVHEVFVKQF--------DNFYGRKTNPIQGD 108

  Fly   123 -------NPFVLTGDEWKERRSEIMPALSPNRVKAVYPVSQSVCKKFVEYIRR-QQQMATSEGLD 179
                   :..:..|..||..|:...|..|.   |::..:..:|.:..||.:|. .:..|..:.:|
 Worm   109 PNKNKRAHLVLAQGHRWKRLRTLASPTFSN---KSLRKIMSTVEETVVELMRHLDEASAKGKAVD 170

  Fly   180 AMDLSLCYTTEVVSDCGLG-VSAQSFTDTPTPLLKMIKRVFNTSFEFIFY---------SVVTNL 234
            .:|....:|.:::....:| ..:..|.:   |:|..:|.:|....:..|.         :::..|
 Worm   171 LLDYYQEFTLDIIGRIAMGQTESLMFRN---PMLPKVKEIFKKGGKMPFLIAGVFPIAGTLMRQL 232

  Fly   235 WQKVRKFYSVPFFNKETEVFFLDIIRRCITLRLE----------KPEQQRDDFLNYMLQ------ 283
            :.|..||  .|.|.      .::.:.:.:..|||          :|..:..||::..|.      
 Worm   233 FMKFPKF--SPAFG------IMNTMEKALNKRLEQRAADKKAGIEPSGEPQDFIDLFLDARANVD 289

  Fly   284 ---------------LQEKKGLHTDNILINTMTFILDGFETTALVLAHIMLMLGRNPEEQDKVRK 333
                           |:..|.|..|.|:.....|:|.|::||||.|::...:|..:||.|.|:::
 Worm   290 FIEEESTLGFAKSEVLKVDKHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLATHPEIQKKLQE 354

  Fly   334 EIG----SADLTFDQMSELPHLDACIYETLRLF--SPQVAARKLVTEPFEFANKNGRTVHLKPGD 392
            |:.    ..::||||:|:|.:::..:.|.||::  :..|..||.:.:      .|...|.:..|.
 Worm   355 EVDRECPDPEVTFDQISKLKYMECVVKEALRMYPLASLVHNRKCMKK------TNVLGVEIDEGT 413

  Fly   393 VVTIPVKALHHDPQYY-EDPLTFKPERFLESNGGGMKSYRDRGVYLAFGDGPRHCPGMRFALTQL 456
            .|.:....||:||:.: :|...|||||: |:   |.:.:..:|.||.||.|||.|.|||.|:.:.
 Worm   414 NVQVDTWTLHYDPKVWGDDASEFKPERW-ET---GDELFYAKGGYLPFGMGPRICIGMRLAMMEE 474

  Fly   457 KAALVEILRNFEIKVNPKT 475
            |..|..||:.:....:.:|
 Worm   475 KLLLTHILKKYTFDTSTET 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28d2NP_608911.1 p450 38..475 CDD:299894 121/505 (24%)
cyp-13A4NP_496111.1 p450 33..514 CDD:278495 122/509 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.