DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp28d2 and cyp-13B1

DIOPT Version :9

Sequence 1:NP_608911.1 Gene:Cyp28d2 / 33748 FlyBaseID:FBgn0031688 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_510233.1 Gene:cyp-13B1 / 181462 WormBaseID:WBGene00008519 Length:510 Species:Caenorhabditis elegans


Alignment Length:529 Identity:127/529 - (24%)
Similarity:239/529 - (45%) Gaps:102/529 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLVLVYVFLT------WNFNYWRKRGIKTAPTWPFVGSFPSIFTRKRNIAYDIDDI-----YEKY 67
            ::|||.:|.|      |...|||:|||......||:|::           ||:.|:     |..:
 Worm     4 IIVLVVLFATIAGYFKWIHTYWRRRGISGPEGLPFIGNY-----------YDLADVNKPRGYLIH 57

  Fly    68 KDTD---NMVGVFTTRVPQLLVMCPEYIHKIYATDFRSFHNNEWRNFVNKKTDMILGN------- 122
            |.|.   .:.|.:...||.|:|...:.:.:::...|.:|       :..|.|:.|.||       
 Worm    58 KWTQKFGKVFGYYEGAVPVLVVSDMDMLQELFLKKFDNF-------YARKSTNHIHGNLECSKSE 115

  Fly   123 ---NPFVLTGDEWKERRSEIMPALSPNRVKAVYPVSQSVCKKFVEYIRRQQQMATSEGLDAMDLS 184
               |.|...|..||..|:...|..|...:|.|:.|.:......|:.:.:.:        |....:
 Worm   116 PRINLFTSRGARWKRLRALASPGFSVKALKQVHDVMEDSAINMVDLMAKHE--------DGKPFN 172

  Fly   185 LC-----YTTEVVSDCGLG-VSAQSFTDTPTPLLKMIKRVFNTSFEFI--FYSVVTNLWQKV--R 239
            :.     :|.:|:|...:| .:::.|.::.   ::::|.:|..:...:  :::|:...::.:  |
 Worm   173 IHAYFQEFTYDVISRLAMGQPNSELFNNSG---VEIVKSIFMRTHRVLPWYFTVLFPQFEHLVKR 234

  Fly   240 KFYS-VPFFNKETEVFFLDIIRRCITLRLEKPEQQR------------DDFLNYMLQLQE----- 286
            .||: ......:.|...| |.::.:..|:::.|:..            |.||||..:..|     
 Worm   235 MFYNHAAVQGGDIEKLLL-ICKKTVESRIQEREENAKLGFENAENDFIDMFLNYYSEQVEDIEFG 298

  Fly   287 ---KKGLHTDNILINTMTFILDGFETTALVLAHIMLMLGRNPEE----QDKVRKEIGSADLTFDQ 344
               :|.:..::::.....|:|.||:|||..||:...:|.::||:    |::|...:||.::::|.
 Worm   299 STVEKKVTAEDVIGACFVFLLAGFDTTANSLAYASYLLAKHPEKMKLAQEEVDTVVGSENVSYDD 363

  Fly   345 MSELPHLDACIYETLRLFS-PQVAARKLVTEPFEFANKNGRTVHLKPGDVVTIPVKALHHDPQYY 408
            |::|.:|||.:.|:|||:. ...|..:...:|....:     :::..|..:...|.:||...:.:
 Worm   364 MTKLKYLDAVVRESLRLYPVAWFACSRECVKPTTLGD-----IYIDKGVKIEADVMSLHRSKEIW 423

  Fly   409 -EDPLTFKPERFLESNGGGMKSYRDRGVYLAFGDGPRHCPGMRFALTQLKAALVEILRNFEIKVN 472
             |:...|.|||:||      .|.|....::.||.|||.|.|||..|::.|.||..:||.:::...
 Worm   424 GENADDFVPERWLE------PSSRHTMSWIPFGAGPRQCVGMRLGLSEAKTALAHLLRRYDLVAG 482

  Fly   473 PKTRSDNQI 481
            .:|..:..|
 Worm   483 VETEKELNI 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28d2NP_608911.1 p450 38..475 CDD:299894 113/491 (23%)
cyp-13B1NP_510233.1 p450 31..479 CDD:306555 113/488 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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