DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp28d2 and tbxas1

DIOPT Version :9

Sequence 1:NP_608911.1 Gene:Cyp28d2 / 33748 FlyBaseID:FBgn0031688 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_031753608.1 Gene:tbxas1 / 100327243 XenbaseID:XB-GENE-994325 Length:532 Species:Xenopus tropicalis


Alignment Length:565 Identity:150/565 - (26%)
Similarity:240/565 - (42%) Gaps:119/565 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 CPVTTFLVLVLTLLVLVYVFLTWNFNYWRKRGIKTAPTWPFVGSFPSIFTRKRNIAYDIDDIYEK 66
            |.||  |.||...|.|:|.:....|....|.|||.....||:|          ||.     :::|
 Frog    12 CTVT--LTLVAGFLGLLYWYSVSAFWQLEKAGIKHPKPLPFIG----------NIM-----LFQK 59

  Fly    67 ---------YKDTDNMVGVFTTRVPQLLVMCPEYIHKIYATDFRSFHNNEWR-NFVNK-KTDMIL 120
                     .|....:.|.:..|.|.:::..|:.|.::...||.:|.|...| |.|.| .:|.:|
 Frog    60 GFWEGDRHLLKTYGPICGYYMGRRPMIVIAEPDAIKQVLQKDFVNFTNRMQRLNLVTKPMSDSLL 124

  Fly   121 GNNPFVLTGDEWKERRSEIMPALSPNRVKAVYPVSQSVCKKFVEYIRRQQQMATSEGLDAMDLSL 185
                 .|..|:||..||.:.|:.|..|:|.:.|:....|...||.:  .:..::.|..:......
 Frog   125 -----CLRDDKWKRVRSVLTPSFSAARMKEMCPLINQCCDVLVENL--MEYASSGEACNVQRCYA 182

  Fly   186 CYTTEVVSDCGLGVSAQSFTDTPTPLLKMIKRVFN--TSFE------FIFYSVVTNLWQKVRKFY 242
            |:|.:||:....|....|..|:..||::..||...  |.|:      ..|.|::..:.:::.   
 Frog   183 CFTMDVVASVAFGTQVDSQRDSDHPLVQNCKRFLELFTPFKPVVLLCLAFPSIMIPIARRLP--- 244

  Fly   243 SVPFFNKETE---VFFLDIIRRCITLR-LEKPEQQRDDFLNYMLQLQEKKG-------------- 289
                 ||..:   .|||.:||..|..| .:.|.::|.|||..||..::..|              
 Frog   245 -----NKHRDRINSFFLKVIRDIIAFRENQPPNERRRDFLQLMLDARDSAGHVSVDHFDIVNQAD 304

  Fly   290 ---------------------LHTDNILINTMTFILDGFETTALVLAHIMLMLGRNPEEQDKVRK 333
                                 |:.:.||.....|::.|:|||..:|:....:|..:|:.|:|:.|
 Frog   305 LSVPQNQDRGQDPPRKSTQKTLNEEEILGQAFIFLIAGYETTCSLLSFASYLLATHPDCQEKLLK 369

  Fly   334 EIGS-----ADLTFDQMSELPHLDACIYETLRLFSPQVAARKLVTEPFEFANKNGRT-----VHL 388
            |:..     .:..::.:.:||:::..|.||||::.|          .:.||.:..|.     :.:
 Frog   370 EVDEFSQEHEEADYNTVHDLPYMEMVINETLRMYPP----------AYRFAREAARDCTVMGLGI 424

  Fly   389 KPGDVVTIPVKALHHDPQYYEDPLTFKPERFLESNGGGMKSYRDRGVYLAFGDGPRHCPGMRFAL 453
            ..|.||.||:..|.:||:::.:|..|.||||....    |..|...::|.||.|||.|.|||.||
 Frog   425 PAGAVVEIPIGCLQNDPRFWHEPEKFNPERFTAEE----KQKRHPFLFLPFGAGPRSCIGMRLAL 485

  Fly   454 TQLKAALVEILRNFEIKVNPKTRSDNQIDDTFFMATL--KGGIYL 496
            .:.|..|..:||.|..:....|:...|:.   .|.||  |.|:|:
 Frog   486 LEAKITLYRVLRKFRFQTCDLTQIPLQLS---AMTTLRPKDGVYV 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28d2NP_608911.1 p450 38..475 CDD:299894 128/504 (25%)
tbxas1XP_031753608.1 cytochrome_P450 71..526 CDD:425388 128/486 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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