DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-13A and ndufs6

DIOPT Version :10

Sequence 1:NP_608909.1 Gene:ND-13A / 33744 FlyBaseID:FBgn0031684 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_001004651.1 Gene:ndufs6 / 447913 ZFINID:ZDB-GENE-040912-86 Length:129 Species:Danio rerio


Alignment Length:125 Identity:61/125 - (48%)
Similarity:76/125 - (60%) Gaps:11/125 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SKQLVNNLSKLGLPRQNWMSPLASVRHSSCRGDIEKVTHTGQVFDKEDYRNARFVNAKRYVNENW 67
            :|.|:|.|....:|.|.:..|:::      .|:|  :||||||:|:.|.|.||||...:.||||:
Zfish    15 TKVLLNCLRLSAVPVQQYSVPVSN------HGEI--ITHTGQVYDENDVRRARFVGRHKEVNENF 71

  Fly    68 GIKLIEEVPPKECTERVVFCDGGDGPLGHPKVYINLDKPGN-HICGYCGLRFVKKDDHHH 126
            .|.|:.|.|......|||.||||.|.||||||||||||... ..||||||:|  |..|||
Zfish    72 AINLVAEEPVTHVESRVVSCDGGGGALGHPKVYINLDKDTRVGTCGYCGLQF--KQTHHH 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-13ANP_608909.1 zf-CHCC 83..118 CDD:463041 26/35 (74%)
ndufs6NP_001004651.1 zf-CHCC 86..123 CDD:463041 26/36 (72%)

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