DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5828 and CAB1

DIOPT Version :10

Sequence 1:NP_608907.1 Gene:CG5828 / 33742 FlyBaseID:FBgn0031682 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_010820.3 Gene:CAB1 / 852144 SGDID:S000002939 Length:367 Species:Saccharomyces cerevisiae


Alignment Length:220 Identity:40/220 - (18%)
Similarity:76/220 - (34%) Gaps:42/220 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 TLDLNTDGKAADYWFNCFRDMVAKFAKVAAKSQEEDH-----TATQRAEQFQAAYLQRLEEHQRN 76
            |.:::.:....|..||...|:....|||.......:.     ..|::.::|.......::||   
Yeast     5 TQEISYNCDYGDNTFNLAIDIGGTLAKVVFSPIHSNRLMFYTIETEKIDKFMELLHSIIKEH--- 66

  Fly    77 VPVNKG-----KVILGTSELLKLNETLLRRYGFTDPWLRQKRLENASAVARLKQRLQELDALADE 136
               |.|     .:|.......|..:.|...:         .:::..|....::..:..||....|
Yeast    67 ---NNGCYRMTHIIATGGGAFKFYDLLYENF---------PQIKGISRFEEMEGLIHGLDFFIHE 119

  Fly   137 DTRWTELVRGVLAGNMFDWGAQAISNILEQDSNFGLHSALDRIEKRPWLLDNLDSWLNRLK-GEP 200
                       :...:|.:..|....|:...|     ..:|.....|:||.|:.|.::.|| .||
Yeast   120 -----------IPDEVFTYNDQDGERIIPTSS-----GTMDSKAIYPYLLVNIGSGVSILKVTEP 168

  Fly   201 HKCAVVFVDNSGVDVVLGVLPFVRG 225
            :..:.|...:.|...:.|:|..:.|
Yeast   169 NNFSRVGGSSLGGGTLWGLLSLITG 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5828NP_608907.1 PLN02902 <6..358 CDD:215489 40/220 (18%)
CAB1NP_010820.3 ASKHA_NBD_PanK-II_Pank4 21..354 CDD:466973 36/204 (18%)

Return to query results.
Submit another query.