DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5828 and PANK1

DIOPT Version :9

Sequence 1:NP_001260085.1 Gene:CG5828 / 33742 FlyBaseID:FBgn0031682 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_176247.2 Gene:PANK1 / 842339 AraportID:AT1G60440 Length:383 Species:Arabidopsis thaliana


Alignment Length:178 Identity:33/178 - (18%)
Similarity:53/178 - (29%) Gaps:75/178 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 EEHQRNVPVNKGKVILGTSELLKLNETL-------LRRYGFTDPWLRQKRLENASAVARLKQRL- 127
            ||.:....|.||::.....|..|:::.|       |...|...|        |.....:|..:. 
plant    31 EESRNGCSVVKGRLCFAKFETRKIDDCLEFIRFNILHHSGVQQP--------NGEGHDKLYVKAT 87

  Fly   128 ------------QELDALADEDTRWTELVRGVLAGNMFDWGAQAISNILEQDSNFGLHSA----- 175
                        ::|..|.|::.....||.||                     ||.|.:.     
plant    88 GGGAFKFADLFKEKLGILFDKEDEMCSLVGGV---------------------NFLLKTVPREAF 131

  Fly   176 -----------LDRIEKRPWLLDNLDSWLNRLKGEPHKCAVVFVDNSG 212
                       :|..:..|:||.|:.|.::.:|          ||..|
plant   132 TYLDGQKKFVEIDHNDLYPYLLVNIGSGVSMIK----------VDGDG 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5828NP_001260085.1 DUF89 54..347 CDD:280170 33/178 (19%)
PANK1NP_176247.2 PLN02920 1..383 CDD:215498 33/178 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5146
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D865329at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm3350
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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