DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5828 and AT4G35360

DIOPT Version :10

Sequence 1:NP_608907.1 Gene:CG5828 / 33742 FlyBaseID:FBgn0031682 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_567984.1 Gene:AT4G35360 / 829689 AraportID:AT4G35360 Length:367 Species:Arabidopsis thaliana


Alignment Length:375 Identity:129/375 - (34%)
Similarity:205/375 - (54%) Gaps:39/375 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYSSSLLPDP------AVYQPDTLDLNTDGKAAD---YWFNCFRDMVAKFAKVAAKSQEEDHTAT 56
            |.:..|||.|      |...|.....:...||..   .|.:.|.:.:..| |..|:|......|.
plant     7 MVALPLLPTPIESNYRACTIPYRFPSDNPRKATPTEISWIDLFSNSIPSF-KERAESDTTVPDAP 70

  Fly    57 QRAEQFQAAYLQRLEEHQRNVPVNKG---KVILGTSELLKLNETLLRRYGFTDPWLRQKRLENAS 118
            .|||:|...|.:.||:.::: |.:.|   ..||    |.::.|.:||..||.|.:.:.|..|||.
plant    71 VRAEKFAKRYAEILEDLKKD-PESHGGPPDCIL----LCRIRELILRELGFRDIFKKVKDEENAK 130

  Fly   119 AVARLKQRLQELDALADEDTRWTELVRGVLAGNMFDWGAQAISNILEQDSNFGLHSALDRIEKRP 183
            |::...:.::..||:.||..|...||||:.|||:||.|:..::.:..:|....|.|. ..:..||
plant   131 AISLFPEVVRLSDAINDEGKRIENLVRGIFAGNIFDLGSAQLAEVFSKDGMSFLASC-QNLVSRP 194

  Fly   184 WLLDNLDSWLNRLKGEPHKCAVVFVDNSGVDVVLGVLPFVRGLLKRGTKVLLCANSEPALNDVTS 248
            |::|:||::..|...:|.|.||:||||||.|::||:|||.|.:|:.|.:|:|.||..|::||||.
plant   195 WVIDDLDNFQARWLKKPWKKAVIFVDNSGADIILGILPFAREMLRLGMQVVLAANELPSINDVTY 259

  Fly   249 EELKSLLDDCSRECEVLEQAWSKGQL-------LVYAN-GQTGPCLDMRTLPKELCDAIAANETD 305
            .||..:|...:.|         .|||       |:.|| |...|.:|:..:.:|:  |..:::.|
plant   260 IELAEILSKLNDE---------NGQLMGVDTSNLLIANSGNDLPVIDLARVSQEV--AYLSSDAD 313

  Fly   306 LLVIEGMGRALHTNLNARFGCETLKLAVIKNKWLAKYLGGEDMFAVVCKF 355
            |:::|||||.:.|||.|:|.|::||:.::|:..:|::|||. ::..|.|:
plant   314 LVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGR-LYDCVIKY 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5828NP_608907.1 PLN02902 <6..358 CDD:215489 128/370 (35%)
AT4G35360NP_567984.1 PLN02902 <45..362 CDD:215489 119/335 (36%)

Return to query results.
Submit another query.