DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5828 and Pank1

DIOPT Version :10

Sequence 1:NP_608907.1 Gene:CG5828 / 33742 FlyBaseID:FBgn0031682 Length:361 Species:Drosophila melanogaster
Sequence 2:XP_006231338.1 Gene:Pank1 / 294088 RGDID:1304677 Length:550 Species:Rattus norvegicus


Alignment Length:148 Identity:34/148 - (22%)
Similarity:52/148 - (35%) Gaps:35/148 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 QELDALADED-TRWTELVRGVLAGNMFDWGAQAISNILEQDSNFGLHSALDRIEKRPWLLDNLDS 191
            :.||..|..| |...:||:.:..|:...:|.|. |.:.....|.......:.|.|.......|.:
  Rat   410 EALDMAAKGDSTNVDKLVKDIYGGDYERFGLQG-SAVASSFGNMMSKEKRESISKEDLARATLVT 473

  Fly   192 WLNRLKGEPHKCAVVFVDNSGVDVVLGVLPFVRGLLKRGTKVLLCANSEPALNDVTSEELKSLLD 256
            ..|.:......||:    |..:|.|:.|..|:|                  :|.|:.:.|...:|
  Rat   474 ITNNIGSIARMCAL----NENIDRVVFVGNFLR------------------INMVSMKLLAYAMD 516

  Fly   257 DCSRECEVLEQAWSKGQL 274
                       .||||||
  Rat   517 -----------FWSKGQL 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5828NP_608907.1 PLN02902 <6..358 CDD:215489 34/148 (23%)
Pank1XP_006231338.1 PHA03321 <7..>102 CDD:223041
ASKHA_NBD_PanK-II_Pank1 190..541 CDD:466985 34/148 (23%)
Blue background indicates that the domain is not in the aligned region.

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