DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5828 and pnk-4

DIOPT Version :10

Sequence 1:NP_608907.1 Gene:CG5828 / 33742 FlyBaseID:FBgn0031682 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_508866.1 Gene:pnk-4 / 180779 WormBaseID:WBGene00006862 Length:755 Species:Caenorhabditis elegans


Alignment Length:357 Identity:140/357 - (39%)
Similarity:210/357 - (58%) Gaps:28/357 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QPDTLDLNTDGKAADYWFNCFRDMVAKFAKVAAKSQE-----EDHTATQRAEQFQAAYLQRLE-- 71
            :|||:|.|.|.:|.::|.......:....|.|..|||     ||  .|.|||.||:.:::.::  
 Worm   406 KPDTIDFNKDEEARNFWIEILDKTINDITKFAIASQENCSNKED--LTNRAEDFQSDFVKTMDII 468

  Fly    72 -EHQRNVPVNKGKVILGTS---ELLKLNETLLRRYGFTDPWLRQKRLENASAVARLKQRLQELDA 132
             ||.         |..|.|   .:|::.|.:|:..||.|.::::|..||.:|:|.|.:.|.::|.
 Worm   469 KEHH---------VAYGNSNARNMLEVREQILQEKGFDDIYVQKKHAENCTAIAELPRVLAKIDE 524

  Fly   133 L---ADEDTRWTELVRGVLAGNMFDWGAQAISNILEQDSNFGLHSALDRIEKRPWLLDNLDSWLN 194
            |   .||.|....:.||:||||:|||||:.:..::..:|.....:|:|.:|.||||.|..||:..
 Worm   525 LKNTGDEKTVLEYVSRGLLAGNVFDWGAKEVVKMMNSESGLTFQTAIDHVENRPWLFDGFDSFYK 589

  Fly   195 RLKGEPHKCAVVFVDNSGVDVVLGVLPFVRGLLKRGTKVLLCANSEPALNDVTSEELKSLLDDCS 259
              |.:.:|..::||||||.|.:||::||.|.||:.|::|::|||:.|||||:|..|:..|..:..
 Worm   590 --KHKEYKSVLIFVDNSGFDYILGIIPFARELLRNGSRVIICANTSPALNDLTYREMVELAPELK 652

  Fly   260 RECEVLEQAWSKGQLLVYANGQTGPCLDMRTLPKELCDAIAANETDLLVIEGMGRALHTNLNARF 324
            .....|.:.....|::....||..||:|.|.:.::|.:.:....|||:||||||||||||.|.:|
 Worm   653 NADSDLAKFIDSNQMMFVQTGQESPCMDARRVHQDLNETVKKFNTDLVVIEGMGRALHTNFNVQF 717

  Fly   325 GCETLKLAVIKNKWLAKYLGGEDMFAVVCKFE 356
            .|::||.||||.:|||..|||: ||:||.|.|
 Worm   718 KCDSLKAAVIKTQWLADRLGGK-MFSVVFKHE 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5828NP_608907.1 PLN02902 <6..358 CDD:215489 140/357 (39%)
pnk-4NP_508866.1 PLN02902 104..748 CDD:215489 139/355 (39%)

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