DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5828 and pnk-4

DIOPT Version :9

Sequence 1:NP_001260085.1 Gene:CG5828 / 33742 FlyBaseID:FBgn0031682 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_508866.1 Gene:pnk-4 / 180779 WormBaseID:WBGene00006862 Length:755 Species:Caenorhabditis elegans


Alignment Length:357 Identity:140/357 - (39%)
Similarity:210/357 - (58%) Gaps:28/357 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QPDTLDLNTDGKAADYWFNCFRDMVAKFAKVAAKSQE-----EDHTATQRAEQFQAAYLQRLE-- 71
            :|||:|.|.|.:|.::|.......:....|.|..|||     ||  .|.|||.||:.:::.::  
 Worm   406 KPDTIDFNKDEEARNFWIEILDKTINDITKFAIASQENCSNKED--LTNRAEDFQSDFVKTMDII 468

  Fly    72 -EHQRNVPVNKGKVILGTS---ELLKLNETLLRRYGFTDPWLRQKRLENASAVARLKQRLQELDA 132
             ||.         |..|.|   .:|::.|.:|:..||.|.::::|..||.:|:|.|.:.|.::|.
 Worm   469 KEHH---------VAYGNSNARNMLEVREQILQEKGFDDIYVQKKHAENCTAIAELPRVLAKIDE 524

  Fly   133 L---ADEDTRWTELVRGVLAGNMFDWGAQAISNILEQDSNFGLHSALDRIEKRPWLLDNLDSWLN 194
            |   .||.|....:.||:||||:|||||:.:..::..:|.....:|:|.:|.||||.|..||:..
 Worm   525 LKNTGDEKTVLEYVSRGLLAGNVFDWGAKEVVKMMNSESGLTFQTAIDHVENRPWLFDGFDSFYK 589

  Fly   195 RLKGEPHKCAVVFVDNSGVDVVLGVLPFVRGLLKRGTKVLLCANSEPALNDVTSEELKSLLDDCS 259
              |.:.:|..::||||||.|.:||::||.|.||:.|::|::|||:.|||||:|..|:..|..:..
 Worm   590 --KHKEYKSVLIFVDNSGFDYILGIIPFARELLRNGSRVIICANTSPALNDLTYREMVELAPELK 652

  Fly   260 RECEVLEQAWSKGQLLVYANGQTGPCLDMRTLPKELCDAIAANETDLLVIEGMGRALHTNLNARF 324
            .....|.:.....|::....||..||:|.|.:.::|.:.:....|||:||||||||||||.|.:|
 Worm   653 NADSDLAKFIDSNQMMFVQTGQESPCMDARRVHQDLNETVKKFNTDLVVIEGMGRALHTNFNVQF 717

  Fly   325 GCETLKLAVIKNKWLAKYLGGEDMFAVVCKFE 356
            .|::||.||||.:|||..|||: ||:||.|.|
 Worm   718 KCDSLKAAVIKTQWLADRLGGK-MFSVVFKHE 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5828NP_001260085.1 DUF89 54..347 CDD:280170 119/301 (40%)
pnk-4NP_508866.1 Fumble 23..345 CDD:281610
DUF89 422..739 CDD:301611 126/329 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 228 1.000 Domainoid score I1413
eggNOG 1 0.900 - - E1_COG5146
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H41235
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D865329at2759
OrthoFinder 1 1.000 - - FOG0006555
OrthoInspector 1 1.000 - - oto17864
orthoMCL 1 0.900 - - OOG6_100565
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R888
SonicParanoid 1 1.000 - - X3690
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.710

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