DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5828 and pnk-1

DIOPT Version :9

Sequence 1:NP_001260085.1 Gene:CG5828 / 33742 FlyBaseID:FBgn0031682 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_740867.1 Gene:pnk-1 / 172327 WormBaseID:WBGene00004068 Length:449 Species:Caenorhabditis elegans


Alignment Length:257 Identity:52/257 - (20%)
Similarity:87/257 - (33%) Gaps:74/257 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 LRRYGFTDPWLRQKRLENASAVARLKQRLQELDALADEDTRWTELVRG-----VLAGNMFDWGAQ 158
            |||   |.|.:|:..:......|..:.::.: |.|.....:..:...|     |.|.:.......
 Worm    21 LRR---TPPKIRKVLVLREKRAAATEDQIMD-DLLLSSKLKRVDSATGSVSPRVCAADALPTTTP 81

  Fly   159 AISNILEQDSNFGLHSALDRIEKRPWLL----DNLDSWLNRLKGEPHKCAVVFVDNSGVDVVLGV 219
            |.|..|.|         ..:..|.|:::    |..:.               |...|.|.|.:| 
 Worm    82 AASTALRQ---------TQKAPKTPYVILPASDTFEK---------------FRKTSRVSVDIG- 121

  Fly   220 LPFVRGLLKRGTKVLLCANS-------EPALNDVTS----EELKSLL------DDCSRECEVLEQ 267
                      ||.:.:..:|       |.:||..|.    |:.|.:|      .|..|....|::
 Worm   122 ----------GTLIKVVYSSVMDEELPEESLNGHTRKYAYEDGKRVLVNFKKFTDMDRFINFLKE 176

  Fly   268 AWS---KGQLLVYANGQTGPCLDMRTLPKELCDAIAANETDLL--VIEGMGRALHTNLNARF 324
            .|:   :|.::....|  |.......:.|||  .:....||.:  :|.|:...|.||::..|
 Worm   177 VWTDRKRGDVIHCTGG--GSYKYSEIIMKEL--GVRLQRTDEMRSLIFGVNFLLSTNVDESF 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5828NP_001260085.1 DUF89 54..347 CDD:280170 52/257 (20%)
pnk-1NP_740867.1 Fumble 116..439 CDD:281610 31/134 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159635
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D865329at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100565
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R888
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.780

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