DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpn11 and EIF3F

DIOPT Version :10

Sequence 1:NP_608905.1 Gene:Rpn11 / 33738 FlyBaseID:FBgn0028694 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_003745.1 Gene:EIF3F / 8665 HGNCID:3275 Length:357 Species:Homo sapiens


Alignment Length:158 Identity:44/158 - (27%)
Similarity:73/158 - (46%) Gaps:36/158 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GGAMPQAAPPTDAPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFA 72
            ||.:.:..|...|.:||:.|:           ...|.|    .|:|.:||. ||.::|:|.:.|:
Human    88 GGRVVRLHPVILASIVDSYER-----------RNEGAA----RVIGTLLGT-VDKHSVEVTNCFS 136

  Fly    73 MPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQS---FEAL 134
            :|...:...| |||..|...|.::.|:....|:::|||         .:|.|| |:.|   .|..
Human   137 VPHNESEDEV-AVDMEFAKNMYELHKKVSPNELILGWY---------ATGHDI-TEHSVLIHEYY 190

  Fly   135 SERA---VAVVVD-PIQSVKGKVVIDAF 158
            |..|   :.:.|| .:|:  |::.|.|:
Human   191 SREAPNPIHLTVDTSLQN--GRMSIKAY 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpn11NP_608905.1 MPN_RPN11_CSN5 19..284 CDD:163700 41/147 (28%)
EIF3FNP_003745.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82
MPN_eIF3f 92..354 CDD:163695 42/154 (27%)
Blue background indicates that the domain is not in the aligned region.

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