Protein Alignment Rpn11 and RPN8

DIOPT Version :9

• Sequence 1: NP_608905.1
• Gene: Rpn11 / 33738
• FlyBaseID: FBgn0028694
• Length: 308
• Species: Drosophila melanogaster
• Sequence 2: NP_014904.3
• Gene: RPN8 / 854435
• SGDID: S000005787
• Length: 338
• Species: Saccharomyces cerevisiae
• Alignment Length: 291
• Identity: 68/291 - (23%)
• Similarity: 121/291 - (41%)
• Gaps: 50/291 - (17%)

  Fly    27 EQVYISSLALLKMLKHGRAGVPME---VMGLMLGEFVDDYTVQVIDVFAMP--QTGTGVSVEAVD 86
            |:|.|:.|.||..|.|.......|   .:|::||: .:..|::|.:.||:|  :......|..:|
Yeast     6 EKVTIAPLVLLSALDHYERTQTKENKRCVGVILGD-ANSSTIRVTNSFALPFEEDEKNSDVWFLD 69

  Fly    87 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSE-RAVAVVVDPIQSVK 150
            ..:...|.:|.|:....|.::|||||.|.    |...|:...:.|:..:: ..:.::||..|...
Yeast    70 HNYIENMNEMCKKINAKEKLIGWYHSGPK----LRASDLKINELFKKYTQNNPLLLIVDVKQQGV 130

  Fly   151 GKVVIDAFRLINPNMLVLGQEPRQTTSNLGHL---------QKPSVQALIHGLNRHYYSISINYR 206
            | :..||:..|..    :..:...|.....||         ::..|:.|:..: |...:..::.|
Yeast   131 G-LPTDAYVAIEQ----VKDDGTSTEKTFLHLPCTIEAEEAEEIGVEHLLRDV-RDQAAGGLSIR 189

  Fly   207 -KNELEQKMLLNLHKKSWKDGLTLSD--YNEHCSINEDTVAEMLDLAKNYNKSLEDEEKMTPEQL 268
             .|:|  |.|..|..| .||.:...|  .|:...||...:.::.|:   :|
Yeast   190 LTNQL--KSLKGLQSK-LKDVVEYLDKVINKELPINHTILGKLQDV---FN-------------- 234

  Fly   269 AIKNVGKQDPKRHLEEKVDKV-MQNNIVQCL 298
            .:.|:|..|......|..|:: :.||:.:.|
Yeast   235 LLPNLGTPDDDEIDVENHDRINISNNLQKAL 265

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn11	NP_608905.1	MPN_RPN11_CSN5	19..284	CDD:163700	63/274 (23%)
RPN8	NP_014904.3	MPN_RPN7_8	6..303	CDD:163693	68/291 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1310
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810