Protein Alignment Rpn11 and RRI1

DIOPT Version :9

• Sequence 1: NP_608905.1
• Gene: Rpn11 / 33738
• FlyBaseID: FBgn0028694
• Length: 308
• Species: Drosophila melanogaster
• Sequence 2: NP_010065.2
• Gene: RRI1 / 851310
• SGDID: S000002375
• Length: 440
• Species: Saccharomyces cerevisiae
• Alignment Length: 286
• Identity: 76/286 - (26%)
• Similarity: 123/286 - (43%)
• Gaps: 71/286 - (24%)

  Fly    18 TDAPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVSV 82
            ||.|   :...|.||.|:..|:..:...|..:|:||:::|..:.| .:.|:|.|.:|..||...|
Yeast    63 TDIP---SYTHVLISKLSCEKITHYAVRGGNIEIMGILMGFTLKD-NIVVMDCFNLPVVGTETRV 123

  Fly    83 EAVDPVFQAKMLDMLKQ-----------------TGRPEMVVGWYHSHPGFGCWLSGVDINTQQS 130
            .|     |.:..:.:.|                 .|....||||:|||||:.||||.:||.||..
Yeast   124 NA-----QLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDL 183

  Fly   131 FEALSERAVAVVVDPIQSVKGKVV-IDAFRLINPNMLVLGQEPRQTTSNLGHLQKPSVQALIHGL 194
            .:...:..||:||||::|::.|:: :.|||.|...     .:....||
Yeast   184 NQRFQDPYVAIVVDPLKSLEDKILRMGAFRTIESK-----SDDNSATS----------------- 226

  Fly   195 NRHYYSISINYRKNELEQKML---LNLHKKSWKDGLTLSDYNEHCSINEDTVAEMLDLAKNYNKS 256
               ||.:......:||.:.:.   ||||      .:...|.:|..|:|     .::|..|.|:..
Yeast   227 ---YYELETIIFDSELNRALFETKLNLH------CVIEDDESEQISLN-----RLIDSMKQYSYL 277

  Fly   257 LEDEEKMTPEQLA-----IKNVGKQD 277
            ::.:...|..:||     :.|..|::
Yeast   278 MDSKNVRTRIKLATTSERVSNENKKN 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn11	NP_608905.1	MPN_RPN11_CSN5	19..284	CDD:163700	75/285 (26%)
RRI1	NP_010065.2	MPN_RPN11_CSN5	62..346	CDD:163700	76/286 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1310
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0.802101	Normalized mean entropy	S108
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.760