DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpn11 and MPND

DIOPT Version :10

Sequence 1:NP_608905.1 Gene:Rpn11 / 33738 FlyBaseID:FBgn0028694 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001287791.1 Gene:MPND / 84954 HGNCID:25934 Length:501 Species:Homo sapiens


Alignment Length:111 Identity:31/111 - (27%)
Similarity:48/111 - (43%) Gaps:19/111 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVF-AMP------QTGTGVSVEAVD 86
            |.:||..|..:..|... ...||:|.:.|.:  |...|::.|. |.|      ...|..::|  :
Human   272 VAVSSNVLFLLDFHSHL-TRSEVVGYLGGRW--DVNSQMLTVLRAFPCRSRLGDAETAAAIE--E 331

  Fly    87 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFE 132
            .::|:..|       |...:||||||||......|..||:.|..::
Human   332 EIYQSLFL-------RGLSLVGWYHSHPHSPALPSLQDIDAQMDYQ 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpn11NP_608905.1 MPN_RPN11_CSN5 19..284 CDD:163700 31/111 (28%)
MPNDNP_001287791.1 RAMA 70..164 CDD:465856
MPN_2A_DUB 266..450 CDD:163698 31/111 (28%)
Blue background indicates that the domain is not in the aligned region.

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