Protein Alignment Rpn11 and CSN6A

DIOPT Version :10

• Sequence 1: NP_608905.1
• Gene: Rpn11 / 33738
• FlyBaseID: FBgn0028694
• Length: 308
• Species: Drosophila melanogaster
• Sequence 2: NP_568839.1
• Gene: CSN6A / 835727
• AraportID: AT5G56280
• Length: 317
• Species: Arabidopsis thaliana
• Alignment Length: 267
• Identity: 50/267 - (18%)
• Similarity: 93/267 - (34%)
• Gaps: 84/267 - (31%)

  Fly    51 VMGLMLGEFVDDYTVQVIDVFAM---PQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHS 112
            |:|:..|.     ||::.:.|.:   |.|.|      :|..|..|..::.|:......::|||.:
plant    62 VIGVQRGR-----TVEIFNSFELLYDPSTQT------LDRSFLEKKQELYKKVFPDFYILGWYST 115

  Fly   113 HPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGK-----------VVIDAFRLINPNML 166
                |......|::..::...::|..|.|:::|..:...|           .|||..    |.::
plant   116 ----GSDAEESDMHIHKALMDINESPVYVLLNPAINHTQKDLPVTIYESELHVIDGI----PQLI 172

  Fly   167 VLG--------QEPRQTTSNLGHLQKPS------VQALIHGLNRHYYSISINYRKNELEQKM--- 214
            ...        :..|.:..::.|| |||      .|...|....|.....:|.|...|.|.:
plant   173 FAHTSYTIETVEAERISVDHVAHL-KPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQNLAAM 236

  Fly   215 ---------------------LLNLHKKSWKDGLTLSDYNE-----------HCSINEDTVAEML 247
                                 |..:..:.::|.. |.:||:           :||.|.:.:.:..
plant   237 QKGDKSCDNSVLRQVSSLLRRLPAMESERFQDNF-LMEYNDKLLITYLAMITNCSSNMNEMVDKF 300

  Fly   248 DLAKNYN 254
            :.|.:.|
plant   301 NTAYDRN 307

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn11	NP_608905.1	MPN_RPN11_CSN5	19..284	CDD:163700	50/267 (19%)
CSN6A	NP_568839.1	MPN_CSN6	9..313	CDD:163694	50/267 (19%)