Protein Alignment Rpn11 and BRCC36B

DIOPT Version :10

• Sequence 1: NP_608905.1
• Gene: Rpn11 / 33738
• FlyBaseID: FBgn0028694
• Length: 308
• Species: Drosophila melanogaster
• Sequence 2: NP_001078118.1
• Gene: BRCC36B / 819866
• AraportID: AT3G06820
• Length: 405
• Species: Arabidopsis thaliana
• Alignment Length: 160
• Identity: 41/160 - (25%)
• Similarity: 70/160 - (43%)
• Gaps: 24/160 - (15%)

  Fly    23 VDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAM-----PQTGTGVSV 82
            |:.:|.|:::.|.      |..:....|:|||:||:.  :|:.......||     ||..:....
plant     6 VNMSEDVWLTCLT------HALSTETEEIMGLLLGDI--EYSKNGESATAMIWGASPQPRSDRQK 62

  Fly    83 EAVD------PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAV 141
            :.|:      ....|:...|...|||...|:|||||||......|.||:.||..::.|....:.:
plant    63 DRVETNPEQLAAASAQADRMTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGL 127

  Fly   142 VVDPIQ---SVKGKVVIDAFRLIN--PNML 166
            :.....   :..|::.:.||:..:  ||.:
plant   128 IFSCFSEDANKVGRIQVIAFQSSDGKPNSI 157

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn11	NP_608905.1	MPN_RPN11_CSN5	19..284	CDD:163700	41/160 (26%)
BRCC36B	NP_001078118.1	MPN_BRCC36	3..363	CDD:163699	41/160 (26%)