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Protein Alignment Rpn11 and Stambp
DIOPT Version :9
Sequence 1: | NP_608905.1 |
Gene: | Rpn11 / 33738 |
FlyBaseID: | FBgn0028694 |
Length: | 308 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001349007.1 |
Gene: | Stambp / 70527 |
MGIID: | 1917777 |
Length: | 424 |
Species: | Mus musculus |
Alignment Length: | 153 |
Identity: | 31/153 - (20%) |
Similarity: | 64/153 - (41%) |
Gaps: | 34/153 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 PTDAPVVDTAEQ----VYISSLALLKMLKH----------------GRAGVPMEVMGLMLGEFV- 60
|...||||.:.: ..|.::..::.|:| ......:|..|::.|:.:
Mouse 227 PAKPPVVDRSLKPGALSVIENVPTIEGLRHIVVPRNLCSEFLQLASANTAKGIETCGVLCGKLMR 291
Fly 61 DDYTVQVIDVFAMPQTGTG---VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSG 122
:::|:..: .:|:...| ...|..:.:| ..|.....:.:||.|:||....:||.
Mouse 292 NEFTITHV---LIPRQNGGPDYCHTENEEEIF-------FMQDDLGLLTLGWIHTHPTQTAFLSS 346
Fly 123 VDINTQQSFEALSERAVAVVVDP 145
||::|..|::.:...::|:|..|
Mouse 347 VDLHTHCSYQMMLPESIAIVCSP 369
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1310 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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