Protein Alignment Rpn11 and Stambp

DIOPT Version :10

• Sequence 1: NP_608905.1
• Gene: Rpn11 / 33738
• FlyBaseID: FBgn0028694
• Length: 308
• Species: Drosophila melanogaster
• Sequence 2: NP_077201.1
• Gene: Stambp / 70527
• MGIID: 1917777
• Length: 424
• Species: Mus musculus
• Alignment Length: 153
• Identity: 31/153 - (20%)
• Similarity: 64/153 - (41%)
• Gaps: 34/153 - (22%)

  Fly    17 PTDAPVVDTAEQ----VYISSLALLKMLKH----------------GRAGVPMEVMGLMLGEFV- 60
            |...||||.:.:    ..|.::..::.|:|                ......:|..|::.|:.:
Mouse   227 PAKPPVVDRSLKPGALSVIENVPTIEGLRHIVVPRNLCSEFLQLASANTAKGIETCGVLCGKLMR 291

  Fly    61 DDYTVQVIDVFAMPQTGTG---VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSG 122
            :::|:..:   .:|:...|   ...|..:.:|       ..|.....:.:||.|:||....:||.
Mouse   292 NEFTITHV---LIPRQNGGPDYCHTENEEEIF-------FMQDDLGLLTLGWIHTHPTQTAFLSS 346

  Fly   123 VDINTQQSFEALSERAVAVVVDP 145
            ||::|..|::.:...::|:|..|
Mouse   347 VDLHTHCSYQMMLPESIAIVCSP 369

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn11	NP_608905.1	MPN_RPN11_CSN5	19..284	CDD:163700	30/151 (20%)
Stambp	NP_077201.1	Interaction with CHMP3. /evidence=ECO:0000250|UniProtKB:O95630	1..127
		USP8_dimer	7..117	CDD:462647
		Interaction with STAM. /evidence=ECO:0000250|UniProtKB:O95630	227..231		1/3 (33%)
		MPN_AMSH_like	254..424	CDD:163697	25/126 (20%)
		JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182	335..348		5/12 (42%)