Protein Alignment Rpn11 and CG2224

DIOPT Version :9

• Sequence 1: NP_608905.1
• Gene: Rpn11 / 33738
• FlyBaseID: FBgn0028694
• Length: 308
• Species: Drosophila melanogaster
• Sequence 2: NP_001263108.1
• Gene: CG2224 / 43617
• FlyBaseID: FBgn0039773
• Length: 420
• Species: Drosophila melanogaster
• Alignment Length: 149
• Identity: 33/149 - (22%)
• Similarity: 68/149 - (45%)
• Gaps: 14/149 - (9%)

  Fly    18 TDAPVVDTAEQVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGV 80
            ||:.:..:...||:....:...||...|...  :|..|::.|. :....:.:..:....|.||
  Fly   239 TDSLLAGSLRLVYVPGDTMEVFLKLALANTSKNIETCGVLAGH-LSQNQLYITHIITPQQQGT-- 300

  Fly    81 SVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDP 145
             .::.:.:.:.::.|:  |.....:.:||.|:||....:||.||::|..|::.:...|:|:|..|
  Fly   301 -PDSCNTMHEEQIFDV--QDQMQLITLGWIHTHPTQTAFLSSVDLHTHCSYQIMMPEALAIVCAP 362

  Fly   146 IQSVKGKVVIDAFRLINPN 164
            ..:..|      |.::.|:
  Fly   363 KYNTTG------FFILTPH 375

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn11	NP_608905.1	MPN_RPN11_CSN5	19..284	CDD:163700	32/148 (22%)
CG2224	NP_001263108.1	USP8_dimer	16..119	CDD:286108
		MPN_AMSH_like	247..419	CDD:163697	31/141 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1310
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.810