Protein Alignment Rpn11 and CSN6

DIOPT Version :9

• Sequence 1: NP_608905.1
• Gene: Rpn11 / 33738
• FlyBaseID: FBgn0028694
• Length: 308
• Species: Drosophila melanogaster
• Sequence 2: NP_524451.1
• Gene: CSN6 / 42661
• FlyBaseID: FBgn0028837
• Length: 341
• Species: Drosophila melanogaster
• Alignment Length: 146
• Identity: 28/146 - (19%)
• Similarity: 60/146 - (41%)
• Gaps: 24/146 - (16%)

  Fly    12 PQ----AAPPTDAPVVDTAEQVYISSLALLKMLKH-----GRAGVPMEVMGLMLGEFVDDYTVQV 67
            ||    ||..|...|.     :.:..|.::.:.:|     .:.|.|.:|.|.::|: .....:::
  Fly    38 PQGNIMAAAGTSGSVT-----ISLHPLVIMNISEHWTRFRAQHGEPRQVYGALIGK-QKGRNIEI 96

  Fly    68 IDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHS--HPGFGCWLSGVDINTQQS 130
            ::.|.:.....| ....::..:..|.....||.......:|||.:  :|      :..||..|:.
  Fly    97 MNSFELKTDVIG-DETVINKDYYNKKEQQYKQVFSDLDFIGWYTTGDNP------TADDIKIQRQ 154

  Fly   131 FEALSERAVAVVVDPI 146
            ..|::|..:.:.::|:
  Fly   155 IAAINECPIMLQLNPL 170

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn11	NP_608905.1	MPN_RPN11_CSN5	19..284	CDD:163700	23/135 (17%)
CSN6	NP_524451.1	MPN_CSN6	52..335	CDD:163694	23/132 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1310
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.810