Protein Alignment Rpn11 and Rpn8

DIOPT Version :9

• Sequence 1: NP_608905.1
• Gene: Rpn11 / 33738
• FlyBaseID: FBgn0028694
• Length: 308
• Species: Drosophila melanogaster
• Sequence 2: NP_001261167.1
• Gene: Rpn8 / 37894
• FlyBaseID: FBgn0002787
• Length: 358
• Species: Drosophila melanogaster
• Alignment Length: 317
• Identity: 72/317 - (22%)
• Similarity: 120/317 - (37%)
• Gaps: 61/317 - (19%)

  Fly    25 TAEQVYISSLALLKMLKH----GRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMP--QTGTGVSVE 83
            :..:|.:..|.||.::.|    |:.|....|:|::||.:.....:.|.:.||:|  :.....||.
  Fly     7 SVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVW 71

  Fly    84 AVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD---- 144
            .:|..:...|..|.|:....|.||||||:.|.    |...||...:........:|.|::|
  Fly    72 FLDHDYLENMYGMFKKVNARERVVGWYHTGPK----LHQNDIAINELVRRYCPNSVLVIIDAKPK 132

  Fly   145 ----PIQ---SVK-----GKVVIDAFRLINPNMLVLGQEPRQTT-----------SNLGHL-QKP 185
                |.:   ||:     |......|..:...   :|.|..:..           :.:|.| ||.
  Fly   133 DLGLPTEAYISVEEVHDDGSPTSKTFEHVPSE---IGAEEAEEVGVEHLLRDIKDTTVGSLSQKI 194

  Fly   186 SVQAL-IHGLNRHYYSISINYRKNELEQKMLLNLHKKSWKDGLTLSD-YNEHCSINEDTVAEMLD 248
            :.|.: :.|||.....|. .|.:...:.||.:| |:..::    |.| :|....|..|.....:.
  Fly   195 TNQLMGLKGLNAQLRDIK-QYLQRVGDSKMPIN-HQIVYQ----LQDIFNLLPDITNDQFTGTMY 253

  Fly   249 LAKNYNKSLEDEEKMTPEQLAIKNV------------GKQDPKRHLEEKVDKVMQNN 293
            :..|....:.....|....:|:.|:            ||.|.|...|:..|...::|
  Fly   254 VKTNDQMLVVYLASMVRSIIALHNLINNKLANRDAEEGKSDSKEAKEKNKDSKDKDN 310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn11	NP_608905.1	MPN_RPN11_CSN5	19..284	CDD:163700	69/306 (23%)
Rpn8	NP_001261167.1	PLN03246	7..308	CDD:215645	71/313 (23%)
		MPN_RPN7_8	9..290	CDD:163693	65/293 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1310
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.810