Protein Alignment Rpn11 and Cops5

DIOPT Version :10

• Sequence 1: NP_608905.1
• Gene: Rpn11 / 33738
• FlyBaseID: FBgn0028694
• Length: 308
• Species: Drosophila melanogaster
• Sequence 2: NP_001020866.1
• Gene: Cops5 / 312916
• RGDID: 1310301
• Length: 334
• Species: Rattus norvegicus
• Alignment Length: 261
• Identity: 92/261 - (35%)
• Similarity: 142/261 - (54%)
• Gaps: 38/261 - (14%)

  Fly    31 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMPQTG--TGVSVEAVDPVFQAKM 93
            ||:||||||:.|.|:|..:||||||||: ||..|:.::|.||:|..|  |.|:.:|....:.|..
  Rat    57 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAY 120

  Fly    94 LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK-GKVVIDA 157
            ::..||.||.|..:||||||||:||||||:|::||...:...|..||||:||.:::. |||.:.|
  Rat   121 IENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGA 185

  Fly   158 FRLINPNMLVLGQEPRQ-TTSNLGHLQKPSVQALIHGLNRHYYSISINYRKNELEQKMLLNLHKK 221
            ||..........:.|.: .|..|..::...|..      :.||::.::|.|:.|::|:|..|..|
  Rat   186 FRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHC------KQYYALEVSYFKSSLDRKLLELLWNK 244

  Fly   222 SWKDG------LTLSDYNEHCSINEDTVAEMLDLAKNYNKS------------LEDEEKMTPEQL 268
            .|.:.      ||.:||         |..::.||::...:|            ||..::.:.::|
  Rat   245 YWVNTLSSSSLLTNADY---------TTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDKL 300

  Fly   269 A 269
            |
  Rat   301 A 301

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn11	NP_608905.1	MPN_RPN11_CSN5	19..284	CDD:163700	92/261 (35%)
Cops5	NP_001020866.1	MPN_RPN11_CSN5	44..314	CDD:163700	92/261 (35%)