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Protein Alignment Rpn11 and Brcc3
DIOPT Version :9
Sequence 1: | NP_608905.1 |
Gene: | Rpn11 / 33738 |
FlyBaseID: | FBgn0028694 |
Length: | 308 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001159929.1 |
Gene: | Brcc3 / 210766 |
MGIID: | 2389572 |
Length: | 291 |
Species: | Mus musculus |
Alignment Length: | 181 |
Identity: | 46/181 - (25%) |
Similarity: | 77/181 - (42%) |
Gaps: | 50/181 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 VVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDY---------------------TV 65
||...:.|::.|.|.|..|.|..:....|||||.:||..||. |:
Mouse 5 VVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDIRSDSKFTYTGTEMRTVQEKMDTI 69
Fly 66 QVIDVFAM----------------PQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHP 114
:::.:.:: |:..:..|.|| .::.:: ||||..|||||||||
Mouse 70 RIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEA------ERLAEL---TGRPMRVVGWYHSHP 125
Fly 115 GFGCWLSGVDINTQQSFEALSERAVAVV----VDPIQSVKGKVVIDAFRLI 161
....|.|.||:.||..::.:.:..|.:: ::...:..|:|:...|:.|
Mouse 126 HITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSI 176
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1310 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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