Protein Alignment Rpn11 and eif-3.F

DIOPT Version :9

• Sequence 1: NP_608905.1
• Gene: Rpn11 / 33738
• FlyBaseID: FBgn0028694
• Length: 308
• Species: Drosophila melanogaster
• Sequence 2: NP_495988.1
• Gene: eif-3.F / 174478
• WormBaseID: WBGene00001229
• Length: 294
• Species: Caenorhabditis elegans
• Alignment Length: 253
• Identity: 55/253 - (21%)
• Similarity: 93/253 - (36%)
• Gaps: 89/253 - (35%)

  Fly    52 MGLMLGEFVDDYTVQVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGW------- 109
            ||.::| :.:..::||.:.||:|...:...:| :|..|..:|:..||:|...|..|||
 Worm    38 MGTLMG-YYEKGSIQVTNCFAIPFNESNDDLE-IDDQFNQQMISALKKTSPNEQPVGWFLTTSDI 100

  Fly   110 ------YHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD-----------PIQS-------VK 150
                  ||.:        .|.:.|:.|....|...|.:.:|           |:::       :.
 Worm   101 TSSCLIYHDY--------YVRVITEASARRESPPIVVLTIDTTFSGDMSKRMPVRAYLRSKAGIP 157

  Fly   151 G------------KVVIDAFRLINPNMLV--------LGQEPRQTT--SNLGHLQKPSVQALIHG 193
            |            :|.:.||    |..||        |....|:.|  |.|..|:..:.| :|..
 Worm   158 GAAGPHCAIFNPLRVELAAF----PGELVAMQLIEKALDSRRREATLESGLEQLETSTAQ-MIEW 217

  Fly   194 LNR--HYY-SISINYRK------------------NELEQKMLLNLHKKSWKDGLTLS 230
            |.|  ||. .::.|..|                  |.::.:.|..|.|.:.:|.:.:|
 Worm   218 LERMLHYVEDVNKNGEKPGDAQIGRQLMDIVTASSNNMQPEKLDTLVKNTLRDYVMVS 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn11	NP_608905.1	MPN_RPN11_CSN5	19..284	CDD:163700	55/253 (22%)
eif-3.F	NP_495988.1	MPN_eIF3f	7..291	CDD:163695	55/253 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1310
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810